@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1694: (2016-03-28 )
MTNQDRPMKSMSESKCYKNRQVFPQDTNHHHTMFGGTLMANIDEIAAITAMKHAGAQVVTASTDSVDFLKPIKTGDILQYVAMVSYAGTSSMEVVVQIRIDDVFNNKHDLAALSYLTFVALDDEGKPKHVPGVYPEDDVEKWFYDTAPQRVERRKARRIESKQTIEYLAQVQHIRD

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

COA_A_5(1VPM)
?
[Raw transfer]



COA_A_5(1VPM)
?
[Raw transfer]



COA_C_6(1VPM)
?
[Raw transfer]



COA_A_8(1Y7U)
?
[Raw transfer]



COA_A_8(1Y7U)
?
[Raw transfer]



COA_B_9(4IEN)
?
[Raw transfer]



COA_C_11(4IEN)
?
[Raw transfer]



COA_A_5(4IEN)
?
[Raw transfer]



COA_D_15(4IEN)
?
[Raw transfer]



CIT_A_7(3BJK)
Y827_HAEIN
[Raw transfer]
1 PsiBlast_PDB 90.3199% -93 - C1 -4NCP - ? -
2 PsiBlast_PDB 74.5249% -85 - C1 -3SPS - ? -
22 PsiBlast_CBE 70.7047% -88 - C1 -1VPM - ? -
4 PsiBlast_PDB 69.9937% -90 - C1 -1Y7U 5.3 ?
32 HHSearch 69.9438% -90 - C1 -1Y7U 5.3 ?
34 HHSearch 69.9047% -81 - C1 -1VPM 6.1 ?
3 PsiBlast_PDB 69.0847% -87 - C1 -1VPM 5.8 ?
21 PsiBlast_CBE 68.8347% -89 - C1 -1VPM 5.8 ?
35 HHSearch 67.7530% -87 - C1 -2QQ2 - BACH_HUMAN -
6 PsiBlast_PDB 67.4632%-101 - C1 -2QQ2 - BACH_HUMAN -
23 PsiBlast_CBE 67.2934%-113 - C1 -4ZV3 - BACH_MOUSE -
24 PsiBlast_CBE 67.2234%-113 - C1 -4ZV3 - BACH_MOUSE -
38 HHSearch 65.3335%-112 * C1 *2EIS - ? -
5 PsiBlast_PDB 65.1534%-114 - C1 -4ZV3 - BACH_MOUSE -
27 PsiBlast_CBE 65.0831%-106 - C1 -4IEN 4.1 ?
25 PsiBlast_CBE 64.3731%-106 - C1 -4IEN 3.9 ?
7 PsiBlast_PDB 63.6439%-115 - C1 -2EIS - ? -
26 PsiBlast_CBE 63.5431%-105 - C1 -4IEN 3.7 ?
33 HHSearch 63.2831%-101 - C1 -2Q2B - BACH_MOUSE -
8 PsiBlast_PDB 62.4931%-106 - C1 -4IEN 3.7 ?