@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1704: (2016-03-28 )
MIVKTEEELQALKEIGYICAKVRNTMQAATKPGITTKELDNIAKELFEEYGAISAPIHDENFPGQTCISVNEEVAHGIPSKRVIREGDLVNIDVSALKNGYYADTGISFVVGESDDPMKQKVCDVATMAFENAIAKVKPGTKLSNIGKAVHNTARQNDLKVIKNLTGHGVGLSLHEAPAHVLNYFDPKDKTLLTEGMVLAIEPFISSNASFVTEGKNEWAFETSDKSFVAQIEHTVIVTKDGPILTTKIEEE

Atome Classification :

(47 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

M3C_A_5(1QXZ)
MAP1_STAAM
[Raw transfer]




M2C_A_6(1QXY)
MAP1_STAAM
[Raw transfer]




M2C_A_6(1QXY)
MAP1_STAAM
[Raw transfer]




M1C_A_6(1QXW)
MAP1_STAAM
[Raw transfer]




W29_A_4(3D27)
MAP1_ECOLI
[Raw transfer]




5C1_A_3(4A6W)
?
[Raw transfer]




YE7_A_4(2P98)
MAP1_ECOLI
[Raw transfer]




MPJ_A_5(1C24)
MAP1_ECOLI
[Raw transfer]




IKY_B_7(4A6V)
?
[Raw transfer]




MPH_A_5(1C23)
MAP1_ECOLI
[Raw transfer]




NLP_A_9(2GU6)
MAP1_ECOLI
[Raw transfer]




IKY_A_5(4A6V)
?
[Raw transfer]




FC2_A_5(2EVM)
MAP1_ECOLI
[Raw transfer]




MET_A_5(1YJ3)
MAP12_MYCTU
[Raw transfer]




MET_C_17(4FO8)
?
[Raw transfer]




A04_A_5(2Q94)
MAP1_ECOLI
[Raw transfer]




FCD_A_5(1XNZ)
MAP1_ECOLI
[Raw transfer]




FC3_A_5(2EVC)
MAP1_ECOLI
[Raw transfer]




MET_A_5(2GGC)
MAP1_ECOLI
[Raw transfer]




MET_D_21(4FO8)
?
[Raw transfer]




FCD_A_4(3IU7)
MAP12_MYCTU
[Raw transfer]




YE6_A_4(2P99)
MAP1_ECOLI
[Raw transfer]




GOL_A_9(2B3H)
MAP11_HUMAN
[Raw transfer]




B23_A_5(2Q92)
MAP1_ECOLI
[Raw transfer]




MET_A_5(1C21)
MAP1_ECOLI
[Raw transfer]




MET_B_4(3MX6)
MAP1_RICPR
[Raw transfer]




HCM_A_4(4IF7)
MAP12_MYCTU
[Raw transfer]




MET_A_3(3MX6)
MAP1_RICPR
[Raw transfer]




MET_A_3(3MX6)
MAP1_RICPR
[Raw transfer]




MF3_A_5(1C22)
MAP1_ECOLI
[Raw transfer]




GOL_A_11(1WY2)
PEPQ_PYRHO
[Raw transfer]




T03_A_5(3IU8)
MAP12_MYCTU
[Raw transfer]




CIT_B_5(3TB5)
?
[Raw transfer]




1AY_A_6(4HXX)
MAP11_HUMAN
[Raw transfer]




HED_A_2(4IDY)
MAP12_MYCTU
[Raw transfer]




1 PsiBlast_PDB 99.48100% -87 - C2 -1QXW 3.4 MAP1_STAAM
102 HHSearch 99.34100% -86 - C2 -1QXY 3.3 MAP1_STAAM
2 PsiBlast_PDB 99.34100% -86 - C2 -1QXY 3.3 MAP1_STAAM
3 PsiBlast_PDB 97.90100% -85 - C2 -1QXZ 3.3 MAP1_STAAM
59 PsiBlast_CBE 74.0834% -71 - C2 -3MAT - MAP1_ECOLI -
56 PsiBlast_CBE 73.9834% -73 - C2 -1C23 5.0 MAP1_ECOLI
96 PsiBlast_CBE 73.8731% -74 - C2 -4FLJ - MAP11_HUMAN -
57 PsiBlast_CBE 73.6834% -73 - C2 -1C22 2.6 MAP1_ECOLI
100 PsiBlast_CBE 73.5031% -72 - C2 -4IU6 - MAP11_HUMAN -
104 HHSearch 73.0933% -70 - C2 -2GG2 - MAP1_ECOLI -
97 PsiBlast_CBE 72.8331% -74 - C2 -4FLI - MAP11_HUMAN -
33 PsiBlast_CBE 72.7734% -69 - C2 -2GU5 - MAP1_ECOLI -
89 PsiBlast_CBE 72.6831% -74 - C2 -4U73 - MAP11_HUMAN -
12 PsiBlast_PDB 72.6534% -72 - C2 -2GG0 - MAP1_ECOLI -
88 PsiBlast_CBE 72.5931% -74 - C2 -4U75 - MAP11_HUMAN -
107 HHSearch 72.5536% -65 - C2 -3PKA - MAP12_MYCTU -
98 PsiBlast_CBE 72.4331% -73 - C2 -4HXX 5.0 MAP11_HUMAN
87 PsiBlast_CBE 72.3731% -73 - C2 -4U76 - MAP11_HUMAN -
30 PsiBlast_CBE 72.3734% -69 - C2 -4A6V 3.3 ?
18 PsiBlast_PDB 72.3534% -67 - C2 -2GG9 - MAP1_ECOLI -
58 PsiBlast_CBE 72.1634% -72 - C2 -1C21 3.1 MAP1_ECOLI
55 PsiBlast_CBE 71.8934% -72 - C2 -1C24 3.2 MAP1_ECOLI
7 PsiBlast_PDB 71.2934% -68 - C2 -4A6V 3.8 ?
43 PsiBlast_CBE 71.0434% -70 - C2 -3D27 3.2 MAP1_ECOLI
48 PsiBlast_CBE 70.9534% -66 - C2 -2EVM 3.9 MAP1_ECOLI
80 PsiBlast_CBE 70.8237% -62 - C2 -3IU8 4.0 MAP12_MYCTU
42 PsiBlast_CBE 70.6034% -70 - C2 -2P98 4.0 MAP1_ECOLI
39 PsiBlast_CBE 70.2234% -70 - C2 -2Q94 4.0 MAP1_ECOLI
103 HHSearch 70.0533% -63 - C2 -3MX6 3.2 MAP1_RICPR
49 PsiBlast_CBE 69.4034% -64 - C2 -2EVC 4.1 MAP1_ECOLI
40 PsiBlast_CBE 69.3234% -69 - C2 -2Q92 2.5 MAP1_ECOLI
77 PsiBlast_CBE 69.2437% -61 - C2 -1YJ3 3.1 MAP12_MYCTU
61 PsiBlast_CBE 69.0734% -68 - C2 -4A6W 3.8 ?
101 HHSearch 69.0031% -66 - C2 -2B3H 2.4 MAP11_HUMAN
81 PsiBlast_CBE 68.7737% -63 - C2 -3IU7 3.7 MAP12_MYCTU
20 PsiBlast_PDB 68.7334% -72 - C2 -2GGC 3.1 MAP1_ECOLI
38 PsiBlast_CBE 68.4234% -71 - C2 -2P99 4.1 MAP1_ECOLI
10 PsiBlast_PDB 68.2134% -65 - C2 -2GU6 3.8 MAP1_ECOLI
51 PsiBlast_CBE 67.4634% -67 - C2 -1XNZ 3.5 MAP1_ECOLI
82 PsiBlast_CBE 67.3837% -64 - C2 -4IF7 2.6 MAP12_MYCTU
68 PsiBlast_CBE 67.3034% -67 - C2 -3MX6 3.1 MAP1_RICPR
83 PsiBlast_CBE 67.2537% -62 - C2 -4IDY 1.9 MAP12_MYCTU
21 PsiBlast_CBE 66.0335% -63 - C2 -4FO8 3.1 ?
70 PsiBlast_CBE 65.7031% -70 - C2 -3TB5 2.8 ?
69 PsiBlast_CBE 64.5334% -66 - C2 -3MX6 3.2 MAP1_RICPR
22 PsiBlast_CBE 64.2735% -63 - C2 -4FO8 3.1 ?
113 HHSearch 58.5230% -55 - C2 -1WY2 2.7 PEPQ_PYRHO