@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1722: (2016-03-28 )
MYDIKKWRHIFKLDPAKHISDDDLDAICMSQTDAIMIGGTDDVTEDNVIHLMSRIRRYPLPLVLEISNIESVMPGFDFYFVPTVLNSTDVAFHNGTLLEALKTYGHSIDFEEVIFEGYVVCNADSKVAKHTKANTDLTTEDLEAYAQMVNHMYRLPVMYIEYSGIYGDVSKVQAVSEHLTETQLFYGGGISSEQQATEMAAIADTIIVGDIIYKDIKKALKTVKIKESSK

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CIT_A_3(2F6U)
GGGPS_ARCFU
[Raw transfer]



CIT_A_3(2F6U)
GGGPS_ARCFU
[Raw transfer]



1GP_B_13(3VZY)
PCRB_BACSU
[Raw transfer]



1GP_B_5(4NAE)
?
[Raw transfer]



CIT_B_4(2F6U)
GGGPS_ARCFU
[Raw transfer]



1GP_A_3(2F6X)
GGGPS_ARCFU
[Raw transfer]



1GP_B_4(2F6X)
GGGPS_ARCFU
[Raw transfer]



FPS_B_5(3VZZ)
PCRB_BACSU
[Raw transfer]



FPS_B_4(3W00)
PCRB_BACSU
[Raw transfer]
22 PsiBlast_CBE 97.7799%-140 - C2 -3W01 - PCRB_STAA1 -
2 PsiBlast_PDB 97.7199%-137 - C2 -3W02 - PCRB_STAA1 -
21 PsiBlast_CBE 97.4099%-134 - C2 -3W02 - PCRB_STAA1 -
1 PsiBlast_PDB 97.2599%-139 - C2 -3W01 - PCRB_STAA1 -
32 HHSearch 96.6898%-140 - C2 -3W01 - PCRB_STAA1 -
4 PsiBlast_PDB 83.0349%-144 - C2 -4NAF - ? -
3 PsiBlast_PDB 80.8949%-149 - C2 -4NAE 4.3 ?
7 PsiBlast_PDB 80.4847%-126 - C2 -3VZZ - PCRB_BACSU -
6 PsiBlast_PDB 80.4847%-126 - C2 -3VZY - PCRB_BACSU -
5 PsiBlast_PDB 80.3947%-129 - C2 -3VZX - PCRB_BACSU -
31 HHSearch 80.2945%-129 - C2 -3VZX - PCRB_BACSU -
8 PsiBlast_PDB 80.0947%-128 - C2 -3W00 - PCRB_BACSU -
26 PsiBlast_CBE 79.4247%-123 - C2 -3VZX - PCRB_BACSU -
9 PsiBlast_PDB 79.4246%-127 - C2 -1VIZ - PCRB_BACSU -
23 PsiBlast_CBE 79.3747%-121 - C2 -3W00 6.3 PCRB_BACSU
24 PsiBlast_CBE 78.7947%-119 - C2 -3VZZ 4.7 PCRB_BACSU
50 Fugue 78.7245%-122 - C2 -1VIZ - PCRB_BACSU -
30 HHSearch 78.5342%-122 - C2 -2F6U 4.1 GGGPS_ARCFU
25 PsiBlast_CBE 78.3447%-120 - C2 -3VZY 3.7 PCRB_BACSU
27 PsiBlast_CBE 78.0846%-127 - C2 -1VIZ - PCRB_BACSU -
10 PsiBlast_PDB 76.2342%-120 - C2 -2F6U 4.1 GGGPS_ARCFU
29 PsiBlast_CBE 75.9642%-117 - C2 -2F6U 3.8 GGGPS_ARCFU
11 PsiBlast_PDB 75.1742%-115 - C2 -2F6X 3.8 GGGPS_ARCFU
28 PsiBlast_CBE 75.0442%-119 - C2 -2F6X 3.4 GGGPS_ARCFU