@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1859: (2016-03-29 )
MSKTQHEVNQNIDPLKMAESLELEQLNEKTLNDMRSGSEVLVEALLKENVDYLFGYPGGAVLPLYDTFYDGKIKHILARHEQGAVHAAEGYARVSGKTGVVVVTSGPGATNVMTGITDAHCDSLPLVVFTGQVATPGIGKDAFQEADILSMTSPITKQNYQVKRVEDIPKIVHEAFHVANSGRKGPVVIDFPKDMGVLATNVDLCDEINIPGYEVVTEPENKDIDTFISLLKEAKKPVVLAGAGINQSKSNQLLTQFVNKHQIPTVTTLLGLGAVPYEDTLFLGMGGMHGSYASNMALTECDLLINLGSRFDDRLASKPDAFAPNAKIVHVDIDPSEINKVIHVDLGIIADCKRFLECLNDKNVETIEHSDWVKHCQNNKQKHPFKLGEEDQVFCKPQQTIEYIGKITNGEAIVTTDVGQHQMWAAQFYPFKNHGQWVTSGGLGTMGFGIPSSIGAKLANPDKTVVCFVGDGGFQMTNQEMALLPEYGLDVKIVLINNGTLGMVKQWQDKFFNQRFSHSVFNGQPDFMKMAEAYGVKGFLIDKPEQLEEQLDAAFAYQGPVLIEVRISPTEAVTPMVPSGKSNHEMEGL

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FAD_B_12(1T9B)
ILVB_YEAST
[Raw transfer]



FAD_A_10(1T9A)
ILVB_YEAST
[Raw transfer]



FAD_A_10(1N0H)
ILVB_YEAST
[Raw transfer]



FAD_B_11(1T9C)
ILVB_YEAST
[Raw transfer]



FAD_A_9(1T9B)
ILVB_YEAST
[Raw transfer]



FAD_B_14(1T9A)
ILVB_YEAST
[Raw transfer]



FAD_A_9(1T9B)
ILVB_YEAST
[Raw transfer]



FAD_B_14(1N0H)
ILVB_YEAST
[Raw transfer]



1CS_B_11(1T9B)
ILVB_YEAST
[Raw transfer]



1TB_B_11(1T9A)
ILVB_YEAST
[Raw transfer]



1TB_A_7(1T9A)
ILVB_YEAST
[Raw transfer]



1CS_A_7(1T9B)
ILVB_YEAST
[Raw transfer]



1SM_B_10(1T9C)
ILVB_YEAST
[Raw transfer]



FAD_A_11(1JSC)
ILVB_YEAST
[Raw transfer]



CIE_B_11(1N0H)
ILVB_YEAST
[Raw transfer]



CIE_A_7(1N0H)
ILVB_YEAST
[Raw transfer]



AYD_A_9(1N0H)
ILVB_YEAST
[Raw transfer]



P22_A_12(1T9C)
ILVB_YEAST
[Raw transfer]
22 PsiBlast_CBE 92.9141% -83 - C2 -1T9D - ILVB_YEAST -
23 PsiBlast_CBE 92.8741% -83 - C2 -1T9D - ILVB_YEAST -
25 PsiBlast_CBE 92.5141% -80 - C2 -1T9B 11.6 ILVB_YEAST
26 PsiBlast_CBE 92.3341% -79 - C2 -1T9A 13.3 ILVB_YEAST
27 PsiBlast_CBE 92.1341% -80 - C2 -1N0H 12.7 ILVB_YEAST
24 PsiBlast_CBE 91.9741% -80 - C2 -1T9C 13.4 ILVB_YEAST
4 PsiBlast_PDB 91.8041% -79 - C2 -1T9C 5.2 ILVB_YEAST
1 PsiBlast_PDB 91.7541% -80 - C2 -1N0H 13.2 ILVB_YEAST
39 HHSearch 91.7143% -80 - C2 -1T9B 13.3 ILVB_YEAST
2 PsiBlast_PDB 91.7141% -78 - C2 -1T9A 13.3 ILVB_YEAST
21 PsiBlast_CBE 91.6741% -79 - C2 -1T9D - ILVB_YEAST -
5 PsiBlast_PDB 91.4841% -81 - C2 -1T9D - ILVB_YEAST -
6 PsiBlast_PDB 90.9741% -84 - C2 -1JSC 12.9 ILVB_YEAST
3 PsiBlast_PDB 90.9441% -81 - C2 -1T9B 13.2 ILVB_YEAST
41 HHSearch 82.9332% -78 * C2 *2PAN - GCL_ECOLI -
7 PsiBlast_PDB 82.4232% -84 - C2 -2PAN - GCL_ECOLI -
45 HHSearch 78.5325% -88 - C2 -3EYA - POXB_ECOLI -
10 PsiBlast_PDB 77.0727% -83 - C2 -4RJI - ? -
15 PsiBlast_PDB 77.0328% -76 - C2 -4FEE - ? -
11 PsiBlast_PDB 77.0127% -83 - C2 -4RJJ - ? -