@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1874: (2016-03-29 )
MSDKYYRSAYMNVDLNAVASNFKVFSTLHPNKTVMAVVKANAYGLGSVKVARHLMENGATFFAVATLDEAIELRMHGITAKILVLGVLPAKDIDKAIQHRVALTVPSKQWLKEAIKNISGEQEKKLWLHIKLDTGMGRLGIKDTNTYQEVIEIIQQYEQLVFEGVFTHFACADEPGDMTTEQYQRFKDMVNEAIKPEYIHCQNSAGSLLMDCQFCNAIRPGISLYGYYPSEYVQQKVKVHLKPSVQLIANVVQTKTLQAGESVSYGATYTATDPTTIALLPIGYADGYLRIMQGSFVNVNGHQCEVIGRVCMDQTIVKVPDQVKAGDSVILIDNHRESPQSVEVVAEKQHTINYEVLCNLSRRLPRIYHDGDQRFVTNELLK

Atome Classification :

(27 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

BME_A_5(3OO2)
ALR1_STAAC
[Raw transfer]




IN5_B_4(1BD0)
ALR_GEOSE
[Raw transfer]




DCS_C_6(3E6E)
?
[Raw transfer]




IN5_A_3(1BD0)
ALR_GEOSE
[Raw transfer]




PLP_A_3(4A3Q)
ALR1_STAAM
[Raw transfer]




DCS_B_5(3E6E)
?
[Raw transfer]




PLP_B_11(4A3Q)
ALR1_STAAM
[Raw transfer]




DCS_A_3(4LUT)
?
[Raw transfer]




DCS_A_4(3E6E)
?
[Raw transfer]




IN5_A_3(1BD0)
ALR_GEOSE
[Raw transfer]




IN5_A_3(1BD0)
ALR_GEOSE
[Raw transfer]




PLP_C_10(3E5P)
?
[Raw transfer]




PLP_B_7(3E5P)
?
[Raw transfer]




PLP_A_4(3E5P)
?
[Raw transfer]




PLP_A_5(1SFT)
ALR_GEOSE
[Raw transfer]




PLP_B_4(1XFC)
ALR_MYCTU
[Raw transfer]




PLP_A_3(1XFC)
ALR_MYCTU
[Raw transfer]




PLP_B_6(1SFT)
ALR_GEOSE
[Raw transfer]




PLP_A_3(3CO8)
LYSR_OENOB
[Raw transfer]




PLP_A_3(3CO8)
LYSR_OENOB
[Raw transfer]




PLP_A_3(1XFC)
ALR_MYCTU
[Raw transfer]




GOL_B_18(4DYJ)
ALR_PSEPU
[Raw transfer]




2PE_C_9(3E5P)
?
[Raw transfer]




2 PsiBlast_PDB 99.2199%-129 - C1 -3OO2 - ALR1_STAAC -
22 PsiBlast_CBE 94.1299%-126 - C1 -3OO2 Error ALR1_STAAC
21 PsiBlast_CBE 93.40100%-129 - C1 -4A3Q 3.8 ALR1_STAAM
1 PsiBlast_PDB 92.35100%-128 - C1 -4A3Q 3.8 ALR1_STAAM
23 PsiBlast_CBE 78.1943%-114 - C1 -1SFT 4.4 ALR_GEOSE
24 PsiBlast_CBE 77.6543%-114 - C1 -1BD0 7.8 ALR_GEOSE
3 PsiBlast_PDB 77.1043%-114 - C1 -1SFT 4.2 ALR_GEOSE
4 PsiBlast_PDB 76.5643%-111 - C1 -1BD0 - ALR_GEOSE -
66 HHSearch 75.3643%-111 - C1 -1BD0 7.5 ALR_GEOSE
8 PsiBlast_PDB 75.3239%-109 - C1 -3HA1 - ? -
7 PsiBlast_PDB 74.2540%-128 - C1 -4ILS - ALR_GEOSE -
28 PsiBlast_CBE 71.9138%-107 - C1 -3E5P 3.6 ?
10 PsiBlast_PDB 71.8836%-114 - C1 -4LUT 5.1 ?
11 PsiBlast_PDB 71.7736%-116 - C1 -4LUS - ? -
25 PsiBlast_CBE 71.4238%-109 - C1 -3E6E 5.6 ?
27 PsiBlast_CBE 70.9938%-106 - C1 -3E5P 3.2 ?
13 PsiBlast_PDB 70.7932%-112 - C1 -1XFC 3.6 ALR_MYCTU
26 PsiBlast_CBE 70.3738%-109 - C1 -3E6E 5.4 ?
5 PsiBlast_PDB 70.3738%-102 - C1 -3E5P 4.5 ?
6 PsiBlast_PDB 70.2438%-102 - C1 -3E6E 6.0 ?
65 HHSearch 69.6538%-102 * C1 *3E5P 2.2 ?
14 PsiBlast_PDB 67.6131%-110 - C1 -3CO8 4.3 LYSR_OENOB
29 PsiBlast_CBE 67.5332%-111 - C1 -1XFC 4.4 ALR_MYCTU
67 HHSearch 66.9331%-108 - C1 -3CO8 4.3 LYSR_OENOB
69 HHSearch 65.9632%-100 - C1 -1XFC 3.8 ALR_MYCTU
54 Fugue 57.1644%-102 - C1 -1BD0 7.0 ALR_GEOSE
56 Fugue 54.5341% -99 - C1 -1BD0 6.9 ALR_GEOSE