@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1915: (2016-03-30 )
MSYITKQDKVIAEAIEREFQRQNSNIELIASENFVSEAVMEAQGSVLTNKYAEGYPGRRYYGGCEFVDVTESIAIDRAKALFGAEHVNVQPHSGSQANMAVYLVALEMGDTVLGMNLSHGGHLTHGAPVNFSGKFYNFVEYGVDKDTERINYDEVRKLALEHKPKLIVAGASAYSRTIDFKKFKEIADEVNAKLMVDMAHIAGLVAAGLHPNPVEYADFVTTTTHKTLRGPRGGMILCKEEYKKDIDKTIFPGIQGGPLEHVIAAKAVAFGEALENNFKTYQQQVVKNAKVLAEALINEGFRIVSGGTDNHLVAVDVKGSIGLTGKEAEETLDSVGITCNKNTIPFDQEKPFVTSGIRLGTPAATTRGFDEKAFEEVAKIISLALKNSKDEEKLQQAKERVAKLTAEYPLYQ

Atome Classification :

(69 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

2BO_A_3(4WXG)
GLYA_STRT1
[Raw transfer]



2BO_C_6(4WXG)
GLYA_STRT1
[Raw transfer]



PLG_C_6(4WXF)
GLYA_STRT1
[Raw transfer]



PLG_A_3(4WXF)
GLYA_STRT1
[Raw transfer]



FON_H_8(1KL2)
?
[Raw transfer]



ALO_A_3(2W7G)
?
[Raw transfer]



PLG_A_4(1RVY)
GLYC_RABIT
[Raw transfer]



PLP_A_3(2W7K)
?
[Raw transfer]



PLP_A_3(2VMO)
?
[Raw transfer]



GLY_A_2(2VMO)
?
[Raw transfer]



PLP_A_3(2VGV)
?
[Raw transfer]



PLP_A_3(2VMW)
?
[Raw transfer]



GLY_A_2(2VGT)
?
[Raw transfer]



PLP_A_3(2VIB)
?
[Raw transfer]



PLP_A_3(2VGU)
?
[Raw transfer]



PLP_A_3(2W7M)
?
[Raw transfer]



PLP_A_3(2VMT)
?
[Raw transfer]



PLP_A_2(2W7L)
?
[Raw transfer]



PLP_A_2(2W7G)
?
[Raw transfer]



PLP_A_3(2VI9)
?
[Raw transfer]



PLP_C_3(1KKP)
?
[Raw transfer]



GOL_B_5(4PVF)
GLYM_HUMAN
[Raw transfer]



PLP_A_3(2VMU)
?
[Raw transfer]



GOL_A_3(4PVF)
GLYM_HUMAN
[Raw transfer]



PLP_A_3(2VMQ)
?
[Raw transfer]



PLP_A_2(2VMX)
?
[Raw transfer]



PLP_C_3(1KL1)
?
[Raw transfer]



PLP_A_3(2VMP)
?
[Raw transfer]



PLP_A_3(2VGT)
?
[Raw transfer]



PLP_A_3(2VIA)
?
[Raw transfer]



PLP_C_3(1YJZ)
?
[Raw transfer]



PLP_A_3(2W7J)
?
[Raw transfer]



PLP_C_3(1YJS)
?
[Raw transfer]



PLP_A_3(2W7H)
?
[Raw transfer]



PLP_A_2(1BJ4)
GLYC_HUMAN
[Raw transfer]



PLP_A_3(2W7E)
?
[Raw transfer]



PLP_A_3(2VMZ)
?
[Raw transfer]



PLP_A_2(2W7I)
?
[Raw transfer]



PLP_A_6(1RV3)
GLYC_RABIT
[Raw transfer]



PLP_A_2(2VMV)
?
[Raw transfer]



PLP_A_9(1RV4)
GLYC_RABIT
[Raw transfer]



PLP_A_6(1RV3)
GLYC_RABIT
[Raw transfer]



PLP_A_2(2VI8)
?
[Raw transfer]



PLP_A_2(2W7D)
?
[Raw transfer]



PLP_A_3(2VMS)
?
[Raw transfer]



PLP_A_5(2DKJ)
GLYA_THET8
[Raw transfer]



PLP_A_2(2VMR)
?
[Raw transfer]



PLP_B_4(1CJ0)
GLYC_RABIT
[Raw transfer]



PLP_A_3(1KKJ)
?
[Raw transfer]



PLP_A_2(2VI8)
?
[Raw transfer]



PLP_A_2(2VGS)
?
[Raw transfer]



PLP_A_3(2W7F)
?
[Raw transfer]



PLP_B_9(1RVU)
GLYC_RABIT
[Raw transfer]



PLP_A_2(2VMN)
?
[Raw transfer]



PLP_B_7(1RV3)
GLYC_RABIT
[Raw transfer]



PLP_A_7(1RVU)
GLYC_RABIT
[Raw transfer]



PLP_B_11(1RV4)
GLYC_RABIT
[Raw transfer]



ALO_A_3(2W7L)
?
[Raw transfer]



PLP_A_5(2DKJ)
GLYA_THET8
[Raw transfer]



PLP_B_6(2DKJ)
GLYA_THET8
[Raw transfer]



PLP_A_3(1CJ0)
GLYC_RABIT
[Raw transfer]



PLP_A_2(1BJ4)
GLYC_HUMAN
[Raw transfer]



PLP_A_3(2VGW)
?
[Raw transfer]



PLP_B_5(1RVY)
GLYC_RABIT
[Raw transfer]



PLP_C_3(1YJY)
?
[Raw transfer]



FON_G_7(1KL2)
?
[Raw transfer]



FFO_B_8(2VMY)
?
[Raw transfer]



FFO_A_6(2VMY)
?
[Raw transfer]



PLP_A_2(3G8M)
GLYA_ECOLI
[Raw transfer]
22 PsiBlast_CBE 98.2099% -89 - C1 -3PGY - GLYA_STAAC -
1 PsiBlast_PDB 97.3499% -87 - C1 -3PGY - GLYA_STAAC -
21 PsiBlast_CBE 96.7899% -89 - C1 -3PGY - GLYA_STAAC -
23 PsiBlast_CBE 96.1499% -86 - C1 -3PGY - GLYA_STAAC -
39 PsiBlast_CBE 89.5871% -77 - C1 -2VMR 4.4 ?
37 PsiBlast_CBE 89.4071% -76 - C1 -2VMT 4.6 ?
14 PsiBlast_PDB 89.3971% -78 - C1 -2VI8 4.4 ?
31 PsiBlast_CBE 89.2371% -77 - C1 -2W7M 4.2 ?
34 PsiBlast_CBE 89.0271% -74 - C1 -2W7J 4.3 ?
29 PsiBlast_CBE 89.0071% -76 - C1 -2VMO 3.7 ?
11 PsiBlast_PDB 88.9871% -76 - C1 -2VGU 4.3 ?
28 PsiBlast_CBE 88.8771% -76 - C1 -2VMP 4.3 ?
8 PsiBlast_PDB 88.8271% -76 - C1 -2VGT 4.0 ?
33 PsiBlast_CBE 88.8171% -76 - C1 -2W7K 4.1 ?
18 PsiBlast_PDB 88.7971% -77 - C1 -2W7D 4.5 ?
30 PsiBlast_CBE 88.7771% -75 - C1 -2VMN 4.5 ?
38 PsiBlast_CBE 88.7671% -75 - C1 -2VMS 3.1 ?
27 PsiBlast_CBE 88.7071% -76 - C1 -2VMQ 4.3 ?
15 PsiBlast_PDB 88.6871% -76 - C1 -2VIB 3.8 ?
5 PsiBlast_PDB 88.6272% -76 - C1 -1KL2 4.0 ?
19 PsiBlast_PDB 88.5471% -76 - C1 -2W7E 4.3 ?
45 PsiBlast_CBE 88.4671% -76 - C1 -2VMV 4.3 ?
40 PsiBlast_CBE 88.4571% -77 - C1 -2VMZ 3.1 ?
35 PsiBlast_CBE 88.3771% -74 - C1 -2W7I 3.0 ?
25 PsiBlast_CBE 88.3571% -76 - C1 -2W7H 2.9 ?
44 PsiBlast_CBE 88.3371% -75 - C1 -2VMW 4.4 ?
2 PsiBlast_PDB 88.3072% -76 - C1 -1KKJ 3.2 ?
42 PsiBlast_CBE 88.2871% -77 - C1 -2VMY 4.0 ?
26 PsiBlast_CBE 88.2871% -75 - C1 -2W7G 3.4 ?
16 PsiBlast_PDB 88.2871% -76 - C1 -2VIA 4.0 ?
36 PsiBlast_CBE 88.2771% -73 - C1 -2VMU 4.1 ?
9 PsiBlast_PDB 88.2371% -76 - C1 -2VGV 4.3 ?
32 PsiBlast_CBE 88.2171% -75 - C1 -2W7L 4.4 ?
20 PsiBlast_PDB 88.2171% -75 - C1 -2W7F 3.3 ?
4 PsiBlast_PDB 88.1572% -77 - C1 -1KL1 4.5 ?
43 PsiBlast_CBE 88.1271% -76 - C1 -2VMX 4.1 ?
10 PsiBlast_PDB 88.0071% -75 - C1 -2VGW 4.1 ?
7 PsiBlast_PDB 87.9371% -76 - C1 -2VGS 4.3 ?
13 PsiBlast_PDB 87.8971% -77 - C1 -1YJZ 3.8 ?
17 PsiBlast_PDB 87.8671% -74 - C1 -2VI9 3.9 ?
3 PsiBlast_PDB 87.8672% -74 - C1 -1KKP 4.5 ?
114 HHSearch 87.7571% -76 - C1 -2VI8 4.4 ?
24 PsiBlast_CBE 87.7572% -75 - C1 -1KL2 4.9 ?
12 PsiBlast_PDB 87.7471% -77 - C1 -1YJY 4.2 ?
41 PsiBlast_CBE 87.5671% -75 - C1 -2VMY 4.1 ?
6 PsiBlast_PDB 87.0971% -75 - C1 -1YJS 4.4 ?
47 PsiBlast_CBE 85.1864% -74 - C1 -2DKJ 3.2 GLYA_THET8
73 PsiBlast_CBE 85.1659% -75 - C1 -4WXG 6.5 GLYA_STRT1
74 PsiBlast_CBE 84.5159% -76 - C1 -4WXG 6.1 GLYA_STRT1
46 PsiBlast_CBE 84.2764% -76 - C1 -2DKJ 3.1 GLYA_THET8
75 PsiBlast_CBE 84.2359% -74 - C1 -4WXF 5.4 GLYA_STRT1
76 PsiBlast_CBE 83.7459% -76 - C1 -4WXF 5.8 GLYA_STRT1
117 HHSearch 82.4462% -74 * C1 *2DKJ 3.2 GLYA_THET8
68 PsiBlast_CBE 79.5759% -72 - C1 -3G8M 4.3 GLYA_ECOLI
102 Fugue 79.1546% -73 - C1 -1BJ4 2.7 GLYC_HUMAN
81 PsiBlast_CBE 78.2241% -80 - C1 -4PVF 3.3 GLYM_HUMAN
82 PsiBlast_CBE 77.6541% -76 - C1 -4PVF 3.0 GLYM_HUMAN
111 HHSearch 76.6846% -72 - C1 -1RV3 2.8 GLYC_RABIT
83 PsiBlast_CBE 76.0045% -72 - C1 -1BJ4 2.7 GLYC_HUMAN
93 PsiBlast_CBE 75.6446% -76 - C1 -1RV4 3.8 GLYC_RABIT
91 PsiBlast_CBE 75.5246% -75 - C1 -1RVU 3.3 GLYC_RABIT
89 PsiBlast_CBE 75.1846% -74 - C1 -1RVY 3.6 GLYC_RABIT
87 PsiBlast_CBE 75.0246% -77 - C1 -1CJ0 4.7 GLYC_RABIT
95 PsiBlast_CBE 74.6046% -75 - C1 -1RV3 3.7 GLYC_RABIT
90 PsiBlast_CBE 74.3246% -76 - C1 -1RVY 2.7 GLYC_RABIT
92 PsiBlast_CBE 73.9246% -75 - C1 -1RVU 2.5 GLYC_RABIT
94 PsiBlast_CBE 73.6346% -75 - C1 -1RV4 3.5 GLYC_RABIT
96 PsiBlast_CBE 73.5446% -74 - C1 -1RV3 2.8 GLYC_RABIT
88 PsiBlast_CBE 73.4646% -76 - C1 -1CJ0 4.2 GLYC_RABIT