@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1927: (2016-03-30 )
MPLVSMKEMLIDAKENGYAVGQYNINNLEFTQAILEASQEENAPVILGVSEGAARYMSGFYTIVKMVEGLMHDLNITIPVAIHLDHGSSFEKCKEAIDAGFTSVMIDASHSPFEENVATTKKVVEYAHEKGVSVEAELGTVGGQEDDVVADGIIYADPKECQELVEKTGIDALAPALGSVHGPYKGEPKLGFKEMEEIGLSTGLPLVLHGGTGIPTKDIQKAIPFGTAKINVNTENQIASAKAVRDVLNNDKEVYDPRKYLGPAREAIKETVKGKIKEFGTSNRAK

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

2FP_A_2(3ELF)
ALF_MYCTU
[Raw transfer]



TD4_B_10(3N9S)
?
[Raw transfer]



13P_A_8(3Q94)
?
[Raw transfer]



PGH_A_3(1GVF)
KBAY_ECOLI
[Raw transfer]



PGH_A_3(1GVF)
KBAY_ECOLI
[Raw transfer]



PGH_B_12(1GVF)
KBAY_ECOLI
[Raw transfer]



PGH_A_3(1GVF)
KBAY_ECOLI
[Raw transfer]



13P_A_5(2FJK)
ALF_THECA
[Raw transfer]



PGH_A_5(2ISV)
?
[Raw transfer]



PGH_A_4(2ISW)
?
[Raw transfer]



PGH_B_6(2ISV)
?
[Raw transfer]



PGH_A_4(2ISW)
?
[Raw transfer]



PGH_A_9(3C52)
ALF_HELPY
[Raw transfer]



FLC_A_4(4TO8)
?
[Raw transfer]



FLC_B_6(4TO8)
?
[Raw transfer]



G3P_A_4(3EKZ)
ALF_MYCTU
[Raw transfer]
21 PsiBlast_CBE 95.09100% -79 - C3 -4TO8 2.9 ?
1 PsiBlast_PDB 94.58100% -80 - C3 -4TO8 3.0 ?
2 PsiBlast_PDB 90.9073% -75 - C3 -3Q94 4.6 ?
34 PsiBlast_CBE 80.9644% -72 - C3 -3C56 - ALF_HELPY -
7 PsiBlast_PDB 80.8444% -71 - C3 -3C56 - ALF_HELPY -
6 PsiBlast_PDB 80.0244% -74 - C3 -3C52 3.8 ALF_HELPY
31 PsiBlast_CBE 79.8444% -73 - C3 -3N9R - ? -
30 PsiBlast_CBE 79.5344% -71 - C3 -3N9R - ? -
29 PsiBlast_CBE 79.4344% -72 - C3 -3N9R - ? -
53 HHSearch 79.4149% -59 - C3 -1RVG - ? -
38 PsiBlast_CBE 79.2541% -74 - C3 -1GVF 4.1 KBAY_ECOLI
23 PsiBlast_CBE 79.0844% -67 - C3 -1RVG - ? -
33 PsiBlast_CBE 78.9544% -71 - C3 -3N9R - ? -
35 PsiBlast_CBE 78.8444% -74 - C3 -3C4U - ALF_HELPY -
13 PsiBlast_PDB 78.7841% -77 - C3 -1GVF 3.4 KBAY_ECOLI
52 HHSearch 78.4941% -71 * C3 *1GVF 3.4 KBAY_ECOLI
12 PsiBlast_PDB 78.4444% -64 - C3 -2FJK 4.1 ALF_THECA
8 PsiBlast_PDB 78.4444% -72 - C3 -3N9R - ? -
3 PsiBlast_PDB 78.4444% -66 - C3 -1RV8 - ? -
32 PsiBlast_CBE 78.1544% -71 - C3 -3N9R - ? -
10 PsiBlast_PDB 77.8542% -74 - C3 -2ISV 4.0 ?
28 PsiBlast_CBE 77.8344% -70 - C3 -3N9S 4.4 ?
11 PsiBlast_PDB 77.4342% -73 - C3 -2ISW 3.4 ?
51 HHSearch 77.3147% -68 - C3 -2ISW 3.4 ?
42 Fugue 76.3042% -70 - C3 -1GVF 3.4 KBAY_ECOLI
37 PsiBlast_CBE 75.3742% -69 - C3 -2ISV 3.5 ?