@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1939: (2016-03-30 )
MNSAKLIDHTLLKPESTRTQIDQIIDEAKAYHFKSVCVNPTHVKYAAERLADSEVLVCTVIGFPLGASTTATKAFETEDAIQNGADEIDMVINIGALKDGRFDDVQQDIEAVVKAAKGHTVKVIIETVLLDHDEIVKASELTKVAGADFVKTSTGFAGGGATAEDVKLMKDTVGADVEVKASGGVRNLEDFNKMVEAGATRIGASAGVQIMQGLEADSDY

Atome Classification :

(32 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

HPD_A_5(1UB3)
DEOC_THET8
[Raw transfer]



HPD_C_7(1UB3)
DEOC_THET8
[Raw transfer]



HPD_A_5(1UB3)
DEOC_THET8
[Raw transfer]



HPD_D_8(1UB3)
DEOC_THET8
[Raw transfer]



HPD_B_6(1UB3)
DEOC_THET8
[Raw transfer]



GOL_A_7(3R13)
DEOC_THEMA
[Raw transfer]



CIT_A_3(3R12)
DEOC_THEMA
[Raw transfer]



CIT_A_3(3R12)
DEOC_THEMA
[Raw transfer]



HPD_B_4(1JCL)
DEOC_ECOLI
[Raw transfer]



HPD_A_3(1JCL)
DEOC_ECOLI
[Raw transfer]



HPD_B_4(1JCJ)
DEOC_ECOLI
[Raw transfer]



HPD_A_3(1JCL)
DEOC_ECOLI
[Raw transfer]



HPD_A_3(1JCJ)
DEOC_ECOLI
[Raw transfer]



UNL_B_7(3NG3)
DEOC_MYCA1
[Raw transfer]



UNL_A_4(3NDO)
?
[Raw transfer]



UNL_C_9(3NG3)
DEOC_MYCA1
[Raw transfer]



UNL_D_12(3NG3)
DEOC_MYCA1
[Raw transfer]



UNL_A_4(3NDO)
?
[Raw transfer]



UNL_A_6(3NG3)
DEOC_MYCA1
[Raw transfer]



UNL_B_7(3NDO)
?
[Raw transfer]
51 HHSearch 97.3153% -88 - C2 -3NGJ - ? -
23 PsiBlast_CBE 97.0154% -93 - C2 -3NGJ - ? -
50 HHSearch 96.7854% -84 * C2 *3R12 3.0 DEOC_THEMA
21 PsiBlast_CBE 96.4754% -93 - C2 -3NGJ - ? -
1 PsiBlast_PDB 96.3654% -91 - C2 -3NGJ - ? -
22 PsiBlast_CBE 95.5254% -91 - C2 -3NGJ - ? -
3 PsiBlast_PDB 95.1254% -87 - C2 -3R13 1.9 DEOC_THEMA
2 PsiBlast_PDB 94.5554% -87 - C2 -3R12 3.0 DEOC_THEMA
48 HHSearch 93.3348% -87 - C2 -3OA3 - ? -
54 HHSearch 91.8842% -88 - C2 -1MZH - DEOC_AQUAE -
24 PsiBlast_CBE 91.8250% -84 - C2 -3OA3 - ? -
4 PsiBlast_PDB 91.5750% -88 - C2 -3OA3 - ? -
5 PsiBlast_PDB 88.4242% -82 - C2 -1MZH - DEOC_AQUAE -
25 PsiBlast_CBE 87.8442% -81 - C2 -1MZH - DEOC_AQUAE -
26 PsiBlast_CBE 87.1939% -78 - C2 -1UB3 4.1 DEOC_THET8
6 PsiBlast_PDB 86.6239% -76 - C2 -1J2W - DEOC_THET8 -
32 PsiBlast_CBE 86.5543% -77 - C2 -3NG3 2.9 DEOC_MYCA1
52 HHSearch 86.5144% -81 - C2 -3NDO 2.9 ?
31 PsiBlast_CBE 86.3843% -80 - C2 -3NG3 3.2 DEOC_MYCA1
49 HHSearch 86.2839% -76 - C2 -1UB3 3.8 DEOC_THET8
7 PsiBlast_PDB 86.2839% -76 - C2 -1UB3 3.8 DEOC_THET8
9 PsiBlast_PDB 86.2143% -76 - C2 -3NG3 3.0 DEOC_MYCA1
30 PsiBlast_CBE 86.1243% -77 - C2 -3NG3 3.3 DEOC_MYCA1
28 PsiBlast_CBE 85.7339% -80 - C2 -1UB3 3.6 DEOC_THET8
27 PsiBlast_CBE 84.7239% -78 - C2 -1UB3 4.0 DEOC_THET8
29 PsiBlast_CBE 81.9844% -85 - C2 -3NDO 2.9 ?
8 PsiBlast_PDB 81.8144% -84 - C2 -3NDO 2.9 ?
15 PsiBlast_PDB 76.3234% -69 - C2 -1JCJ 3.1 DEOC_ECOLI
64 Fugue 75.5632% -75 - C2 -1JCL 2.7 DEOC_ECOLI
13 PsiBlast_PDB 75.3234% -67 - C2 -1JCL 2.0 DEOC_ECOLI
34 PsiBlast_CBE 75.1034% -66 - C2 -1JCL 1.9 DEOC_ECOLI
35 PsiBlast_CBE 74.5534% -67 - C2 -1JCJ 3.1 DEOC_ECOLI