@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1958: (2016-03-30 )
MLIQLDQIGRMKQGKTILKNISWQIAKGDKWILYGLNGAGKTTLLNILNAYEPATTGGVNLFGKMPGKVGYSAETVRQHIGFVSHSLLEKFQEGERVIDVVISGAFKSIGVYQDIDDEVRNEAHHLLKLVGISAKAQQYIGYLSTGEKQRVMIARALMGQPQVLILDEPAAGLDFIARESLLNILDSLSDSYPTLAMIYVTHFIEEITGNFTKILLLKDGESVQQGLIDDILTSENMSRFFQKNVAVQRWNNRFSMAMLE

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_J_5(4YMU)
?
[Raw transfer]




ATP_J_5(4YMV)
?
[Raw transfer]




ADP_A_2(4U00)
?
[Raw transfer]




25 HHSearch 99.6095%-146 - C1 -2IHY - ? -
1 PsiBlast_PDB 98.0791%-146 - C1 -2IHY - ? -
2 PsiBlast_PDB 70.5833%-130 - C1 -4HZI - ? -
21 PsiBlast_CBE 68.0733%-134 - C1 -4HZI - ? -
37 HHSearch 64.2027%-114 - C1 -3GFO - ECFA3_CLOP1 -
9 PsiBlast_PDB 63.3729%-125 - C1 -3TUI - METN_ECOLI -
19 PsiBlast_PDB 61.9528%-122 - C1 -3GFO - ECFA3_CLOP1 -
41 HHSearch 61.1026%-119 - C1 -2OLJ - ? -
17 PsiBlast_PDB 60.5230%-109 - C1 -2YZ2 - ECFA2_THEMA -
46 Fugue 60.3525%-110 - C1 -3TUZ - METN_ECOLI -
10 PsiBlast_PDB 60.3129%-129 - C1 -3TUZ - METN_ECOLI -
44 HHSearch 60.1226%-111 - C1 -3NH6 - -
14 PsiBlast_PDB 59.4827%-113 - C1 -1VPL - ? -
32 HHSearch 59.3828%-111 * C1 *3TUI - METN_ECOLI -
20 PsiBlast_PDB 58.9926%-130 - C1 -2NQ2 - Y1470_HAEIN -
8 PsiBlast_PDB 58.2029%-118 - C1 -3DHW - METN_ECOLI -
15 PsiBlast_PDB 58.0330%-104 - C1 -4HLU - ECFA2_THEMA -
31 HHSearch 56.2824%-109 - C1 -1V43 - ? -
11 PsiBlast_PDB 55.9029%-101 - C1 -4U00 5.1 ?
27 HHSearch 55.8525%-111 - C1 -3FVQ - FBPC_NEIG1 -