@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1959: (2016-03-30 )
MCGIVGYIGYDNAKELLLKGLEKLEYRGYDSAGIAVVNDDNTTVFKEKGRIAELRKVADSSDFDGPVGIGHTRWATHGVPNHENSHPHQSSNGRFTLVHNGVIENYEELKGEYLQGVSFISETDTEVIVQLVEYFSNQGLSTEEAFTKVVSLLHGSYALGLLDAEDKDTIYVAKNKSPLLLGVGEGFNVIASDALAMLQVTSEYKEIHDHEIVIVKKDEVIIKDADGNVVERDSYIAEIDASDAEKGVYAHYMLKEIHEQPAVMRRIIQEYQDAEGNLKIDQDIINDVKEADRIYVIAAGTSYHAGLVGKEFLEKWAGVPTEVHVASEFVYNMPLLSEKPLFVYISQSGETADSRAVLVETNKLGHKSLTITNVAGSTLSREADHTLLLHAGPEIAVASTKAYTAQIAVLSILSQIVAKEHGREADIDLLRELAKVTTAIEAIVDDAPIMEQIATDFLETTRNAFFIGRTIDYNVSLEGALKLKEISYIQAEGFAGGELKHGTIALIEDGTPVVALATQENVNLSIRGNVKEVVARGAHPCIISMEGLEKEGDTYVIPHVHELLTPLVSVVALQLISYYAALHRDLDVDKPRNLAKSVTVE

Atome Classification :

(31 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

G6P_A_2(1MOR)
GLMS_ECOLI
[Raw transfer]



GLP_A_2(1MOQ)
GLMS_ECOLI
[Raw transfer]



GLP_A_2(1MOQ)
GLMS_ECOLI
[Raw transfer]



GLP_X_2(2VF5)
GLMS_ECOLI
[Raw transfer]



AGP_A_6(1MOS)
GLMS_ECOLI
[Raw transfer]



AGP_A_2(2ZJ4)
GFPT1_HUMAN
[Raw transfer]



G6P_A_2(2ZJ3)
GFPT1_HUMAN
[Raw transfer]



G6P_A_2(2ZJ3)
GFPT1_HUMAN
[Raw transfer]



G6Q_B_4(2J6H)
GLMS_ECOLI
[Raw transfer]



G6Q_A_3(2J6H)
GLMS_ECOLI
[Raw transfer]



BG6_B_4(2PUW)
GFA1_CANAL
[Raw transfer]



BG6_A_3(2PUW)
GFA1_CANAL
[Raw transfer]



GLP_A_2(1MOQ)
?
[Raw transfer]
22 PsiBlast_CBE 87.6241% -86 - C2 -4AMV - GLMS_ECOLI -
2 PsiBlast_PDB 87.5241% -84 - C2 -4AMV - GLMS_ECOLI -
4 PsiBlast_PDB 87.3241% -84 - C2 -2J6H 3.6 GLMS_ECOLI
21 PsiBlast_CBE 87.1741% -86 - C2 -4AMV - GLMS_ECOLI -
25 PsiBlast_CBE 86.9341% -83 - C2 -2J6H 4.3 GLMS_ECOLI
3 PsiBlast_PDB 86.5241% -81 - C2 -1JXA - GLMS_ECOLI -
23 PsiBlast_CBE 86.4041% -84 - C2 -1JXA - GLMS_ECOLI -
28 PsiBlast_CBE 85.7740% -88 - C2 -3OOJ - GLMS_ECOLI -
24 PsiBlast_CBE 85.7641% -79 - C2 -1JXA - GLMS_ECOLI -
27 PsiBlast_CBE 85.6140% -86 - C2 -3OOJ - GLMS_ECOLI -
26 PsiBlast_CBE 85.3840% -83 - C2 -3OOJ - GLMS_ECOLI -
30 PsiBlast_CBE 85.1040% -86 - C2 -3OOJ - GLMS_ECOLI -
32 PsiBlast_CBE 85.0340% -83 - C2 -3OOJ - GLMS_ECOLI -
31 PsiBlast_CBE 84.6140% -83 - C2 -3OOJ - GLMS_ECOLI -
29 PsiBlast_CBE 84.6040% -83 - C2 -3OOJ - GLMS_ECOLI -
7 PsiBlast_PDB 84.2840% -81 - C2 -3OOJ - GLMS_ECOLI -
1 PsiBlast_PDB 83.9198%-110 - C2 -4S1W - ? -
12 PsiBlast_PDB 63.1835% -86 - C2 -2V4M - GFPT1_HUMAN -
42 PsiBlast_CBE 62.0736% -88 - C2 -2PUT - GFA1_CANAL -
34 PsiBlast_CBE 62.0635% -86 - C2 -2V4M - GFPT1_HUMAN -
6 PsiBlast_PDB 59.4741% -85 - C2 -2VF5 3.3 GLMS_ECOLI
18 PsiBlast_PDB 59.4536% -91 - C2 -2PUW 2.8 GFA1_CANAL
9 PsiBlast_PDB 59.1641% -84 - C2 -1MOQ 4.5 GLMS_ECOLI
8 PsiBlast_PDB 58.7141% -82 - C2 -1MOS 4.5 GLMS_ECOLI
10 PsiBlast_PDB 58.6041% -83 - C2 -1MOR 4.2 GLMS_ECOLI
53 HHSearch 57.4740% -82 - C2 -1MOQ 4.5 GLMS_ECOLI
13 PsiBlast_PDB 57.1635% -80 - C2 -2ZJ3 3.5 GFPT1_HUMAN
36 PsiBlast_CBE 56.4236% -86 - C2 -2PUW 3.1 GFA1_CANAL
14 PsiBlast_PDB 56.4235% -80 - C2 -2ZJ4 4.5 GFPT1_HUMAN
49 HHSearch 56.2334% -81 - C2 -2ZJ3 3.5 GFPT1_HUMAN
79 Fugue 37.6839% -66 * C2 *1MOQ Error ?