@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1989: (2016-03-30 )
MQNKQILFNKIPEGMPQEDTFKIEEIDTPKLESDGVLVQTLYISVDPYMRGRMTKADSYVQPFEIGKPIVSHVVAKVIDSTLADYKKGDVVVGMLPWRIINHVQADQITKVPTTDVPLDLYLSVLGMPGQTAYHGLLDIGQPKAGDTVVVSAASGAVGSVVGQIAKIKGCRVVGIAGGDKKVNYLTETLGFDAGIDYKKEDFAEALAQAVPDGIDVYFENVGGTVGDEVFKHLNRFARVPVCGAISSYNHPEADIGPRIQGTLIKKQVMMRGFLVSEFANAFKEASEQLATWVQEGKIQSQVTIEDGFENAPHAFKNLFTGDNFGKQVIKVTE

Atome Classification :

(43 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAP_C_3(1V3T)
PTGR1_CAVPO
[Raw transfer]




NAP_D_4(1V3T)
PTGR1_CAVPO
[Raw transfer]




NAP_A_9(1V3V)
PTGR1_CAVPO
[Raw transfer]




NAP_B_10(1V3V)
PTGR1_CAVPO
[Raw transfer]




NAP_A_3(4HFM)
DBR_TOBAC
[Raw transfer]




NAP_A_4(2ZB8)
PTGR2_HUMAN
[Raw transfer]




NAP_B_4(4NH4)
?
[Raw transfer]




NDP_A_2(2ZB3)
PTGR2_MOUSE
[Raw transfer]




NAP_A_6(2ZB4)
PTGR2_HUMAN
[Raw transfer]




NAP_B_4(2DM6)
PTGR1_CAVPO
[Raw transfer]




NAP_A_3(2DM6)
PTGR1_CAVPO
[Raw transfer]




NAP_A_3(4HFN)
DBR_TOBAC
[Raw transfer]




NAP_B_4(2J3I)
P1_ARATH
[Raw transfer]




NAP_A_2(2VNA)
PTGR2_HUMAN
[Raw transfer]




NAP_A_3(2J3K)
P1_ARATH
[Raw transfer]




NAP_B_5(2J3J)
P1_ARATH
[Raw transfer]




NAP_A_5(2Y05)
PTGR1_HUMAN
[Raw transfer]




NAP_B_5(2J3K)
P1_ARATH
[Raw transfer]




NAP_A_3(2J3J)
P1_ARATH
[Raw transfer]




NAP_B_10(2W98)
PTGR2_HUMAN
[Raw transfer]




NDP_A_2(2ZB7)
PTGR2_HUMAN
[Raw transfer]




NAP_A_2(2W4Q)
PTGR2_HUMAN
[Raw transfer]




NAP_A_3(2J3I)
P1_ARATH
[Raw transfer]




HC4_A_4(2J3J)
P1_ARATH
[Raw transfer]




IMN_A_5(2ZB8)
PTGR2_HUMAN
[Raw transfer]




HC4_B_6(2J3J)
P1_ARATH
[Raw transfer]




5OP_B_12(1V3V)
PTGR1_CAVPO
[Raw transfer]




CIY_A_4(4HFN)
DBR_TOBAC
[Raw transfer]




HNE_B_6(2J3K)
P1_ARATH
[Raw transfer]




5OP_A_11(1V3V)
PTGR1_CAVPO
[Raw transfer]




NCA_A_3(2ZB7)
PTGR2_HUMAN
[Raw transfer]




IMN_A_5(2DM6)
PTGR1_CAVPO
[Raw transfer]




HNE_A_4(2J3K)
P1_ARATH
[Raw transfer]




EDO_A_10(2X7H)
ZADH2_HUMAN
[Raw transfer]




32 PsiBlast_CBE 94.6745%-107 - C1 -4B7C - ? -
26 PsiBlast_CBE 94.6745%-105 - C1 -4B7X - ? -
1 PsiBlast_PDB 94.3145%-107 - C1 -4B7C - ? -
34 PsiBlast_CBE 94.1745%-107 - C1 -4B7C - ? -
33 PsiBlast_CBE 93.8445%-109 - C1 -4B7C - ? -
35 PsiBlast_CBE 93.6445%-109 - C1 -4B7C - ? -
36 PsiBlast_CBE 93.2545%-109 - C1 -4B7C - ? -
21 PsiBlast_CBE 93.2245%-102 - C1 -4B7X - ? -
23 PsiBlast_CBE 93.1245%-102 - C1 -4B7X - ? -
31 PsiBlast_CBE 92.3945%-100 - C1 -4B7X - ? -
28 PsiBlast_CBE 92.3145% -99 - C1 -4B7X - ? -
30 PsiBlast_CBE 92.2645%-104 - C1 -4B7X - ? -
29 PsiBlast_CBE 92.2445%-102 - C1 -4B7X - ? -
27 PsiBlast_CBE 91.6945% -98 - C1 -4B7X - ? -
25 PsiBlast_CBE 91.6445%-100 - C1 -4B7X - ? -
2 PsiBlast_PDB 91.5645% -99 - C1 -4B7X - ? -
3 PsiBlast_PDB 88.5142%-101 - C1 -4HFJ - DBR_TOBAC -
7 PsiBlast_PDB 88.2443% -94 - C1 -4NH4 - ? -
4 PsiBlast_PDB 88.1942% -97 - C1 -4HFM 11.4 DBR_TOBAC
6 PsiBlast_PDB 87.8643%-102 - C1 -4MKR - ? -
37 PsiBlast_CBE 87.4743% -96 - C1 -4NH4 10.0 ?
18 PsiBlast_PDB 87.4536%-101 - C1 -2W4Q 10.3 PTGR2_HUMAN
20 PsiBlast_PDB 87.3736%-104 - C1 -2ZB4 11.1 PTGR2_HUMAN
19 PsiBlast_PDB 86.7736%-104 - C1 -2VNA 10.1 PTGR2_HUMAN
5 PsiBlast_PDB 86.0042%-101 - C1 -4HFN 10.7 DBR_TOBAC
52 PsiBlast_CBE 85.9736%-104 - C1 -2ZB8 11.1 PTGR2_HUMAN
51 PsiBlast_CBE 85.8836%-104 - C1 -2W98 11.0 PTGR2_HUMAN
54 PsiBlast_CBE 85.7034%-106 * C1 *2ZB3 10.3 PTGR2_MOUSE
53 PsiBlast_CBE 85.7036%-102 - C1 -2ZB7 11.2 PTGR2_HUMAN
10 PsiBlast_PDB 84.4242% -95 - C1 -2J3J 10.8 P1_ARATH
9 PsiBlast_PDB 84.4142% -98 - C1 -2J3I 9.0 P1_ARATH
38 PsiBlast_CBE 84.1442% -99 - C1 -2J3K 8.9 P1_ARATH
40 PsiBlast_CBE 83.5742%-100 - C1 -2J3I 6.1 P1_ARATH
11 PsiBlast_PDB 83.4942% -95 - C1 -2J3K 10.0 P1_ARATH
39 PsiBlast_CBE 83.0942% -94 - C1 -2J3J 10.1 P1_ARATH
47 PsiBlast_CBE 80.7439% -96 - C1 -2DM6 11.2 PTGR1_CAVPO
17 PsiBlast_PDB 80.6739% -98 - C1 -2DM6 11.2 PTGR1_CAVPO
14 PsiBlast_PDB 80.6539% -97 - C1 -1V3T 10.3 PTGR1_CAVPO
50 PsiBlast_CBE 79.9739% -96 - C1 -1V3T 10.4 PTGR1_CAVPO
16 PsiBlast_PDB 78.7539% -94 - C1 -1V3V 10.4 PTGR1_CAVPO
48 PsiBlast_CBE 78.5139% -94 - C1 -1V3V 10.6 PTGR1_CAVPO
12 PsiBlast_PDB 76.8040% -94 - C1 -2Y05 10.6 PTGR1_HUMAN
58 PsiBlast_CBE 69.3631% -91 - C1 -2X7H 2.2 ZADH2_HUMAN