@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1991: (2016-03-30 )
MTKTLPEDFIFGGATAAYQAEGATNTDGKGRVAWDTYLEENYWYTAEPASDFYNRYPVDLELSEKFGVNGIRISIAWSRIFPNGYGEVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTPEVLHKDGDFLNRKTIDYFVDYAEYCFKEFPEVKYWTTFNEIGPIGDGQYLVGKFPPGIKYDFEKVFQSHHNMMVAHARAVKLFKDGGYQGEIGVVHALPTKYPFDPSNPEDVRAAELEDIIHNKFILDATYLGKYSRETMEGVQHILSVNGGKLNITDEDYAILDAAKDLNDFLGINYYMSDWMRGYDGESEITHNATGDKGGSKYQLKGVGQREFDVDVPRTDWDWMIYPQGLYDQIMRVVKDYPNYHKIYITENGLGYKDEFIESEKTVHDDARIDYVRQHLNVIADAIKDGANVKGYFIWSLMDVFSWSNGYEKRYGLFYVDFETQERYPKKSAYWYKELAETKEIK

Atome Classification :

(71 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

BGP_B_4(4PBG)
LACG_LACLL
[Raw transfer]




NTZ_B_5(2J7B)
BGLA_THEMA
[Raw transfer]




GI1_B_5(2J7D)
BGLA_THEMA
[Raw transfer]




GI4_B_5(2J7G)
BGLA_THEMA
[Raw transfer]




GIM_A_4(2CES)
BGLA_THEMA
[Raw transfer]




GOX_B_9(2J78)
BGLA_THEMA
[Raw transfer]




IDE_B_5(2J7C)
BGLA_THEMA
[Raw transfer]




NOY_B_6(2J75)
BGLA_THEMA
[Raw transfer]




GIM_B_7(2CES)
BGLA_THEMA
[Raw transfer]




GOX_A_7(2J78)
BGLA_THEMA
[Raw transfer]




GOX_A_7(2J78)
BGLA_THEMA
[Raw transfer]




TCB_B_6(4PTV)
?
[Raw transfer]




BGC_A_2(3WH6)
?
[Raw transfer]




BGC_A_2(2E9L)
GBA3_HUMAN
[Raw transfer]




GI4_A_3(2J7G)
BGLA_THEMA
[Raw transfer]




BGC_A_2(4HZ8)
?
[Raw transfer]




TCB_A_3(4PTV)
?
[Raw transfer]




NOJ_A_3(1OIM)
BGLA_THEMA
[Raw transfer]




IFL_B_4(1UZ1)
BGLA_THEMA
[Raw transfer]




CTS_B_6(2CBU)
BGLA_THEMA
[Raw transfer]




GTL_B_5(2J79)
BGLA_THEMA
[Raw transfer]




GI2_B_5(2J7E)
BGLA_THEMA
[Raw transfer]




GTL_A_3(2J79)
BGLA_THEMA
[Raw transfer]




CTS_A_3(2CBU)
BGLA_THEMA
[Raw transfer]




NOY_A_4(2J75)
BGLA_THEMA
[Raw transfer]




NOJ_B_4(1OIM)
BGLA_THEMA
[Raw transfer]




NOJ_B_5(2J77)
BGLA_THEMA
[Raw transfer]




IFL_A_3(1UZ1)
BGLA_THEMA
[Raw transfer]




BGC_A_2(4HZ7)
?
[Raw transfer]




CGB_B_5(2CBV)
BGLA_THEMA
[Raw transfer]




GOL_D_4(1UG6)
?
[Raw transfer]




FCB_A_2(3WH7)
?
[Raw transfer]




BGC_A_3(4PTX)
?
[Raw transfer]




CGB_A_3(2CBV)
BGLA_THEMA
[Raw transfer]




SRT_A_24(3CMJ)
?
[Raw transfer]




OXZ_A_3(1W3J)
BGLA_THEMA
[Raw transfer]




GOL_A_3(3WH5)
?
[Raw transfer]




OXZ_B_4(1W3J)
BGLA_THEMA
[Raw transfer]




AZF_B_7(2J7H)
BGLA_THEMA
[Raw transfer]




YLL_B_6(2JAL)
BGLA_THEMA
[Raw transfer]




IFM_B_4(1OIF)
BGLA_THEMA
[Raw transfer]




BGC_B_5(4PTX)
?
[Raw transfer]




IFM_A_3(1OIF)
BGLA_THEMA
[Raw transfer]




IFM_A_3(3WH8)
?
[Raw transfer]




NCW_B_7(2VRJ)
BGLA_THEMA
[Raw transfer]




NCW_A_3(2VRJ)
BGLA_THEMA
[Raw transfer]




G2F_A_9(1E4I)
BGLA_PAEPO
[Raw transfer]




TRS_A_2(3W53)
?
[Raw transfer]




G2F_A_3(4PTW)
?
[Raw transfer]




TRS_A_2(3W53)
?
[Raw transfer]




G2F_B_5(4PTW)
?
[Raw transfer]




G2F_A_3(1OIN)
BGLA_THEMA
[Raw transfer]




G2F_A_3(3PTM)
?
[Raw transfer]




G2F_B_4(1OIN)
BGLA_THEMA
[Raw transfer]




TRS_B_5(3PTK)
?
[Raw transfer]




G2F_A_9(1UYQ)
BGLA_PAEPO
[Raw transfer]




G2F_B_9(3PTM)
?
[Raw transfer]




TRS_A_3(3PTK)
?
[Raw transfer]




22 PsiBlast_CBE 98.1081% -87 - C2 -1PBG - LACG_LACLL -
21 PsiBlast_CBE 97.5281% -81 - C2 -3PBG - LACG_LACLL -
3 PsiBlast_PDB 97.3181% -83 - C2 -4PBG - LACG_LACLL -
2 PsiBlast_PDB 96.8981% -83 - C2 -2PBG - LACG_LACLL -
23 PsiBlast_CBE 96.8581% -83 - C2 -4PBG 5.1 LACG_LACLL
1 PsiBlast_PDB 96.2781% -80 - C2 -3PBG - LACG_LACLL -
29 PsiBlast_CBE 77.7337% -78 - C2 -4PTW 2.9 ?
101 Fugue 77.3840% -73 - C2 -1QOX - BGLA_BACCI -
11 PsiBlast_PDB 77.3435% -78 - C2 -1UYQ 2.4 BGLA_PAEPO
28 PsiBlast_CBE 76.7437% -79 - C2 -4PTX 3.6 ?
9 PsiBlast_PDB 76.5838% -75 - C2 -1QOX - BGLA_BACCI -
123 HHSearch 76.4034% -74 - C2 -1GNX - ? -
36 PsiBlast_CBE 76.4034% -78 - C2 -1BGG - BGLA_PAEPO -
7 PsiBlast_PDB 76.2937% -79 - C2 -4PTW 2.8 ?
35 PsiBlast_CBE 76.2234% -79 - C2 -1BGG - BGLA_PAEPO -
34 PsiBlast_CBE 76.2134% -78 - C2 -1BGG - BGLA_PAEPO -
14 PsiBlast_PDB 76.1734% -78 - C2 -1BGG - BGLA_PAEPO -
27 PsiBlast_CBE 76.1337% -80 - C2 -3TA9 - ? -
6 PsiBlast_PDB 76.1237% -79 - C2 -4PTV 4.2 ?
30 PsiBlast_CBE 76.0137% -78 - C2 -4PTV 4.0 ?
10 PsiBlast_PDB 75.9535% -77 - C2 -1E4I 2.1 BGLA_PAEPO
8 PsiBlast_PDB 75.8137% -77 - C2 -4PTX 3.7 ?
92 PsiBlast_CBE 74.9334% -72 - C2 -3WH6 3.8 ?
91 PsiBlast_CBE 74.8334% -71 - C2 -3WH7 3.3 ?
90 PsiBlast_CBE 74.3734% -70 - C2 -3WH8 3.5 ?
93 PsiBlast_CBE 74.3134% -72 - C2 -3WH5 2.6 ?
17 PsiBlast_PDB 74.1634% -77 - C2 -1OIM 4.1 BGLA_THEMA
50 PsiBlast_CBE 74.0034% -76 - C2 -2VRJ 4.4 BGLA_THEMA
74 PsiBlast_CBE 73.7734% -78 - C2 -1UZ1 3.8 BGLA_THEMA
70 PsiBlast_CBE 73.7034% -76 - C2 -2CBV 3.8 BGLA_THEMA
69 PsiBlast_CBE 73.5134% -77 - C2 -2CBV 4.2 BGLA_THEMA
71 PsiBlast_CBE 73.4634% -77 - C2 -2CBU 4.6 BGLA_THEMA
19 PsiBlast_PDB 73.4534% -76 - C2 -1W3J 3.8 BGLA_THEMA
72 PsiBlast_CBE 73.1734% -76 - C2 -2CBU 4.8 BGLA_THEMA
73 PsiBlast_CBE 73.0934% -77 - C2 -1W3J 3.5 BGLA_THEMA
76 PsiBlast_CBE 73.0734% -77 - C2 -1OIM 3.8 BGLA_THEMA
65 PsiBlast_CBE 73.0734% -74 - C2 -2J75 4.0 BGLA_THEMA
114 HHSearch 72.8234% -69 - C2 -3W53 3.0 ?
64 PsiBlast_CBE 72.7934% -76 - C2 -2J75 4.2 BGLA_THEMA
54 PsiBlast_CBE 72.7934% -77 - C2 -2J7G 5.2 BGLA_THEMA
52 PsiBlast_CBE 72.6734% -76 - C2 -2J7H 3.5 BGLA_THEMA
16 PsiBlast_PDB 72.6034% -75 - C2 -1OIF 3.7 BGLA_THEMA
75 PsiBlast_CBE 72.5734% -75 - C2 -1OIN 3.9 BGLA_THEMA
61 PsiBlast_CBE 72.4334% -76 - C2 -2J78 4.4 BGLA_THEMA
60 PsiBlast_CBE 72.4234% -76 - C2 -2J79 3.9 BGLA_THEMA
62 PsiBlast_CBE 72.3534% -73 - C2 -2J78 4.1 BGLA_THEMA
51 PsiBlast_CBE 72.3134% -72 - C2 -2JAL 3.5 BGLA_THEMA
18 PsiBlast_PDB 72.2534% -74 - C2 -1OIN 3.1 BGLA_THEMA
56 PsiBlast_CBE 72.1834% -76 - C2 -2J7D 5.4 BGLA_THEMA
20 PsiBlast_PDB 72.1134% -74 - C2 -1UZ1 3.6 BGLA_THEMA
58 PsiBlast_CBE 72.0934% -75 - C2 -2J7B 4.3 BGLA_THEMA
88 PsiBlast_CBE 71.9035% -62 - C2 -3PTK 1.9 ?
49 PsiBlast_CBE 71.8434% -75 - C2 -2VRJ 4.8 BGLA_THEMA
78 PsiBlast_CBE 71.8133% -67 - C2 -3W53 3.0 ?
77 PsiBlast_CBE 71.6634% -75 - C2 -1OIF 3.4 BGLA_THEMA
63 PsiBlast_CBE 71.5934% -75 - C2 -2J77 4.1 BGLA_THEMA
59 PsiBlast_CBE 71.5334% -76 - C2 -2J79 3.8 BGLA_THEMA
86 PsiBlast_CBE 71.4735% -60 - C2 -3PTM 2.8 ?
53 PsiBlast_CBE 71.4634% -75 - C2 -2J7G 5.0 BGLA_THEMA
81 PsiBlast_CBE 71.4332% -74 - C2 -4HZ7 3.7 ?
57 PsiBlast_CBE 71.4034% -74 - C2 -2J7C 5.8 BGLA_THEMA
89 PsiBlast_CBE 71.3833% -75 - C2 -1UG6 2.6 ?
85 PsiBlast_CBE 71.3135% -61 - C2 -3PTM 3.9 ?
87 PsiBlast_CBE 71.1435% -61 - C2 -3PTK 2.5 ?
79 PsiBlast_CBE 71.0632% -74 - C2 -3CMJ 3.1 ?
80 PsiBlast_CBE 71.0532% -74 - C2 -4HZ8 4.0 ?
55 PsiBlast_CBE 71.0534% -76 - C2 -2J7E 5.5 BGLA_THEMA
68 PsiBlast_CBE 70.9434% -75 - C2 -2CES 4.8 BGLA_THEMA
67 PsiBlast_CBE 70.7134% -77 - C2 -2CES 4.3 BGLA_THEMA
126 HHSearch 70.4736% -66 * C2 *2J78 4.1 BGLA_THEMA
120 HHSearch 70.0733% -69 - C2 -2E9L 4.0 GBA3_HUMAN