@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1995: (2016-03-30 )
MILTLTLNPSVDISYPLTALKLDDVNRVQEVSKTAGGKGLNVTRVLAQVGEPVLASGFIGGELGQFIAKKLDHADIKHAFYNIKGETRNCIAILHEGQQTEILEQGPEIDNQEAAGFIKHFEQLLEKVEAVAISGSLPKGLNQDYYAQIIERCQNKGVPVILDCSGATLQTVLENPYKPTVIKPNISELYQLLNQPLDESLESLKQAVSQPLFEGIEWIIVSLGAQGAFAKHNHTFYRVNIPTINVLNPVGSGDSTVAGITSAILNHENDHDLLKKANTLGMLNAQEAQTGYVNLNNYDELFNQIEVLEV

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_B_8(2JG1)
LACC_STAA8
[Raw transfer]




ANP_D_14(2JG1)
LACC_STAA8
[Raw transfer]




ANP_A_6(2JG1)
LACC_STAA8
[Raw transfer]




ANP_C_12(2JG1)
LACC_STAA8
[Raw transfer]




ADP_B_5(2JGV)
LACC_STAA8
[Raw transfer]




ATP_A_4(2F02)
LACC_ENTFA
[Raw transfer]




ADP_D_6(2JGV)
LACC_STAA8
[Raw transfer]




TA6_A_3(3JUL)
?
[Raw transfer]




ATP_B_10(3CQD)
PFKB_ECOLI
[Raw transfer]




F6P_A_5(3N1C)
PFKB_ECOLI
[Raw transfer]




ATP_B_9(3UMO)
PFKB_ECOLI
[Raw transfer]




1 PsiBlast_PDB 99.5699%-107 - C2 -2JGV - LACC_STAA8 -
3 PsiBlast_PDB 98.7098%-104 - C2 -2JG1 - LACC_STAA8 -
22 PsiBlast_CBE 98.2599%-101 - C2 -2JGV 5.5 LACC_STAA8
21 PsiBlast_CBE 97.9499% -99 - C2 -2JGV 5.3 LACC_STAA8
23 PsiBlast_CBE 97.1598%-100 - C2 -2JG1 8.1 LACC_STAA8
32 HHSearch 96.9297%-100 - C2 -2JG1 8.4 LACC_STAA8
24 PsiBlast_CBE 96.8798% -99 - C2 -2JG1 7.9 LACC_STAA8
25 PsiBlast_CBE 96.6298% -97 - C2 -2JG1 8.0 LACC_STAA8
2 PsiBlast_PDB 94.3399% -91 - C2 -2Q5R - LACC_STAAC -
4 PsiBlast_PDB 83.3549% -95 - C2 -2AWD - LACC_ENTFA -
35 HHSearch 82.9350% -98 - C2 -2F02 6.6 LACC_ENTFA
5 PsiBlast_PDB 82.4249% -98 - C2 -2F02 - LACC_ENTFA -
6 PsiBlast_PDB 69.8832% -75 - C2 -2ABQ - ? -
10 PsiBlast_PDB 69.4827% -82 - C2 -3HIC - ? -
9 PsiBlast_PDB 69.4027% -80 - C2 -3Q1Y - ? -
38 HHSearch 69.1033% -80 - C2 -2ABQ - ? -
34 HHSearch 68.3130% -82 - C2 -2JG5 - ? -
12 PsiBlast_PDB 67.6827% -80 - C2 -3JUL 2.9 ?
11 PsiBlast_PDB 67.3627% -75 - C2 -3IE7 - ? -
33 HHSearch 66.3227% -75 - C2 -3IE7 - ? -