@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA2001: (2016-03-31 )
MNHIEISKDVKIPVLGFGVFQIPQEQTAEAVKEAIKAGYRHIDTAQSYLNETEVGQGIEASGIDRSELFITTKVWIENVNYEDTIKSIERSLQRLNLDYLDLVLIHQPYNDVYGSWRALEELKENGKIKAIGVSNFGVDRIVDLGIHNQIQPQVNQIEINPFHQQEEQVAALQQENVVVEAWAPFAEGKNQLFQNQLLQAIADKYNKSIAQVILRWLVERDIVVLAKSVNPERMAQNLDIFDFELTEEDKQQIATLEESNSQFFSHADPEMIKALTSRELDV

Atome Classification :

(44 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAP_B_4(1VP5)
?
[Raw transfer]




NAP_A_3(1VP5)
?
[Raw transfer]




NAP_A_3(4GIE)
PGFS_TRYCC
[Raw transfer]




NAP_A_3(1VP5)
?
[Raw transfer]




NDP_A_2(1US0)
ALDR_HUMAN
[Raw transfer]




NDP_B_4(4G5D)
PGFS_LEIMA
[Raw transfer]




NAP_A_2(3H7U)
AKRC9_ARATH
[Raw transfer]




NAP_A_3(1S1P)
AK1C3_HUMAN
[Raw transfer]




NDP_A_3(4G5D)
PGFS_LEIMA
[Raw transfer]




NAP_A_2(3H7U)
AKRC9_ARATH
[Raw transfer]




NAP_B_2(1A80)
DKGA_CORSC
[Raw transfer]




NDP_A_3(3D3F)
GR_BACSU
[Raw transfer]




NAP_C_3(1VBJ)
PGFS_TRYBB
[Raw transfer]




NDP_B_4(3D3F)
GR_BACSU
[Raw transfer]




NDP_A_4(3WBW)
?
[Raw transfer]




NAP_C_3(1VBJ)
PGFS_TRYBB
[Raw transfer]




NDP_B_6(3WBW)
?
[Raw transfer]




NAP_D_4(1VBJ)
PGFS_TRYBB
[Raw transfer]




NDP_A_4(3WBW)
?
[Raw transfer]




NAD_C_3(1M9H)
DKGA_CORSC
[Raw transfer]




NDP_B_4(3WBY)
?
[Raw transfer]




NA7_A_3(2WZM)
Y2407_MYCS2
[Raw transfer]




NA7_A_3(2WZM)
Y2407_MYCS2
[Raw transfer]




NA7_B_4(2WZM)
Y2407_MYCS2
[Raw transfer]




NDP_A_3(3WBY)
?
[Raw transfer]




GOL_B_8(3O0K)
?
[Raw transfer]




GOL_H_8(1MZR)
DKGA_ECOLI
[Raw transfer]




GOL_C_10(3O0K)
?
[Raw transfer]




GOL_D_12(3O0K)
?
[Raw transfer]




GOL_I_9(1MZR)
DKGA_ECOLI
[Raw transfer]




GOL_D_12(3O0K)
?
[Raw transfer]




GOL_C_10(3O0K)
?
[Raw transfer]




GOL_D_12(3O0K)
?
[Raw transfer]




EDO_B_20(4F40)
PGFS_LEIMA
[Raw transfer]




GLU_A_3(4FZI)
PGFS_TRYCC
[Raw transfer]




EDO_A_10(4F40)
PGFS_LEIMA
[Raw transfer]




GLU_B_4(4FZI)
PGFS_TRYCC
[Raw transfer]




EDO_A_12(4F40)
PGFS_LEIMA
[Raw transfer]




FLC_B_6(4GAC)
AK1A1_MOUSE
[Raw transfer]




CIT_F_6(1VBJ)
PGFS_TRYBB
[Raw transfer]




CIT_E_5(1VBJ)
PGFS_TRYBB
[Raw transfer]




1 PsiBlast_PDB 93.4053% -88 - C6 -1VP5 13.2 ?
21 PsiBlast_CBE 93.3953% -89 - C6 -1VP5 12.8 ?
2 PsiBlast_PDB 93.0555% -83 - C6 -4MHB - ? -
101 HHSearch 92.3553% -81 - C6 -1VP5 13.2 ?
23 PsiBlast_CBE 90.1844% -92 - C6 -4F40 2.5 PGFS_LEIMA
3 PsiBlast_PDB 89.5144% -92 - C6 -4F40 2.4 PGFS_LEIMA
22 PsiBlast_CBE 89.0944% -89 - C6 -4G5D 13.0 PGFS_LEIMA
4 PsiBlast_PDB 88.8444% -91 - C6 -4G5D 12.5 PGFS_LEIMA
6 PsiBlast_PDB 88.8343% -90 - C6 -4FZI 2.5 PGFS_TRYCC
7 PsiBlast_PDB 88.7843% -93 - C6 -4GIE 12.6 PGFS_TRYCC
36 PsiBlast_CBE 86.9845% -93 - C6 -3B3D - YTBE_BACSU -
105 HHSearch 86.6744% -95 - C6 -3O0K 2.7 ?
27 PsiBlast_CBE 86.5743% -91 - C6 -4FZI 2.0 PGFS_TRYCC
37 PsiBlast_CBE 86.0745% -97 - C6 -3B3D - YTBE_BACSU -
112 HHSearch 85.4646% -87 - C6 -3F7J - GR_BACSU -
35 PsiBlast_CBE 84.9748% -99 - C6 -3D3F 11.1 GR_BACSU
31 PsiBlast_CBE 84.9041% -91 - C6 -4Q3M - ? -
10 PsiBlast_PDB 84.6848% -94 - C6 -3F7J - GR_BACSU -
12 PsiBlast_PDB 84.5845% -92 - C6 -3B3D - YTBE_BACSU -
5 PsiBlast_PDB 84.4644% -94 - C6 -3O0K 2.7 ?
26 PsiBlast_CBE 84.3744% -96 - C6 -3O0K 2.7 ?
102 HHSearch 84.3638% -85 - C6 -2WZM 4.8 Y2407_MYCS2
11 PsiBlast_PDB 84.3448% -96 - C6 -3D3F 12.0 GR_BACSU
120 HHSearch 83.8736% -84 - C6 -1MZR 2.9 DKGA_ECOLI
111 HHSearch 83.7534% -87 - C6 -1S1P 13.1 AK1C3_HUMAN
104 HHSearch 83.4840% -86 - C6 -1VBJ 12.5 PGFS_TRYBB
25 PsiBlast_CBE 82.8144% -95 - C6 -3O0K 2.8 ?
50 PsiBlast_CBE 82.7133% -89 - C6 -4GAC 3.6 AK1A1_MOUSE
24 PsiBlast_CBE 82.4644% -93 - C6 -3O0K 2.6 ?
8 PsiBlast_PDB 82.4341% -87 - C6 -1VBJ 12.5 PGFS_TRYBB
114 HHSearch 81.9839% -92 - C6 -3WBW 9.2 ?
39 PsiBlast_CBE 81.8339% -85 - C6 -3WBW 10.8 ?
40 PsiBlast_CBE 81.8139% -87 - C6 -3WBY 4.7 ?
110 HHSearch 81.6639% -83 - C6 -1US0 13.1 ALDR_HUMAN
15 PsiBlast_PDB 81.3539% -85 - C6 -3WBY 5.3 ?
121 HHSearch 81.2635% -81 - C6 -3H7U 10.0 AKRC9_ARATH
28 PsiBlast_CBE 81.1441% -84 - C6 -1VBJ 10.8 PGFS_TRYBB
17 PsiBlast_PDB 80.6238% -80 - C6 -2WZM 4.8 Y2407_MYCS2
13 PsiBlast_PDB 80.3739% -85 - C6 -3WBW 9.3 ?
43 PsiBlast_CBE 79.9639% -76 - C6 -1A80 7.6 DKGA_CORSC
16 PsiBlast_PDB 79.9137% -83 - C6 -1MZR 3.0 DKGA_ECOLI
42 PsiBlast_CBE 79.8038% -80 - C6 -2WZM 2.5 Y2407_MYCS2
98 PsiBlast_CBE 79.4131% -82 - C6 -3H7U 10.3 AKRC9_ARATH
53 PsiBlast_CBE 78.5638% -77 - C6 -1M9H 7.7 DKGA_CORSC