@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA2003: (2016-03-31 )
MTYRMKKWQKLSTITLLMAGVITLNGGEFRSIDKHQIAVADTNVQTPDYEKLRNTWLDVNYGYDKYDEKNDAMKKKFDATEKEAEKLLSSMKTESGRTYLWDSAKDLDNKSADMTRTYRNIEKIAEAMRHPKTTLNTDENKKKVKDALEWLHKNAYGKEPDNKVKELTENFKITDSSKKKALNWWDYEIGTPRSLTNTLILLNDQFSNEEKKKFTAPIKTFAPKSDEILSSVGKAEPAKGGNLVDIAKVKLLESIIEEDKDMMKNSIDSFNKVFTYVQDSATDKERNGFYKDGSYIDHKDVPYTGAYGVVLLEGISQMMPMIKETPFNDKTQNNTTLKSWIDDGFLPLIYKGEMMDLSRGRAISRENETSHSASATVMKSLLRLSDAMDDSTKAKYKKIVKTSVKSDSSYGQNDTLSSYSDISKMKSLMEDSTISTNGLTQQLKIYNDMDRVTYHNKDLDFAFGLSMTSKNVARYESINGENLKGWHTGAGMSYLYNSDVKHYRDNFWATADMKRLAGTTTLENEEPKGTDVKKSSKTFVGGTKFDDQHASIGMDFENQDKTLTAKKSYFILNDKIVFLGTGIKSTDSSKNPVTTIENRKANGYTLYTDDKQTTASDNQGTNSVFLESTNKPKNNIGYHFLNESKITVKKESHTGKWSDINKSQKQDSKTNQYYEVTQKHSNTDSKYAYVLYPGLSKDDFNTKKDKVTVVKQDDDFHVVKDNESVWAGVNYSNSTQTFDINNTKVEVKAKGMFILKNKDDNTYECSFYNPESTNTASDIESKISITGYSITNKNTSTSNESGVHFELTK

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SUGAR_A_2(1OJO)
HYSA_STRPN
[Raw transfer]
-
PVC_A_2(1W3Y)
HYSA_STRPN
[Raw transfer]



SUGAR_B_2(1N7R)
HYSA_STRPN
[Raw transfer]
-
SUGAR_B_2(1LXK)
HYSA_STRPN
[Raw transfer]
-
GOL_A_4(1CB8)
CSLA_PEDHD
[Raw transfer]



GOL_A_2(2WCO)
?
[Raw transfer]



ASC_B_2(1F9G)
HYSA_STRPN
[Raw transfer]



FMT_A_3(2WCO)
?
[Raw transfer]



SUGAR_B_2(1LOH)
HYSA_STRPN
[Raw transfer]
-
SUGAR_B_2(1N7Q)
HYSA_STRPN
[Raw transfer]
-
46M_A_2(1X1I)
XANLY_BACGL
[Raw transfer]



SUGAR_A_2(1OJM)
HYSA_STRPN
[Raw transfer]
-
MLA_X_2(2BRV)
HYSA_STRPN
[Raw transfer]



SUGAR_A_2(1C82)
HYSA_STRPN
[Raw transfer]
-
SUGAR_A_2(1OJP)
HYSA_STRPN
[Raw transfer]
-
SUGAR_A_2(1OJN)
HYSA_STRPN
[Raw transfer]
-
SIE_A_2(2BRP)
HYSA_STRPN
[Raw transfer]



SUGAR_C_3(1I8Q)
HYSA_STRA3
[Raw transfer]
-
35 Fugue 98.1436% -30 - C1 -1F1S - HYSA_STRA3 -
23 HHSearch 97.9338% -29 * C1 *1F1S - HYSA_STRA3 -
16 PsiBlast_PDB 94.4337% -29 - C1 -1OJN 5.3 HYSA_STRPN
2 PsiBlast_PDB 94.1637% -23 - C1 -1I8Q 3.3 HYSA_STRA3
8 PsiBlast_PDB 94.0037% -27 - C1 -1OJP 5.0 HYSA_STRPN
3 PsiBlast_PDB 93.8937% -29 - C1 -1N7O - HYSA_STRPN -
5 PsiBlast_PDB 93.8837% -26 - C1 -1EGU - HYSA_STRPN -
7 PsiBlast_PDB 93.8037% -28 - C1 -1C82 4.8 HYSA_STRPN
20 PsiBlast_PDB 93.7737% -31 - C1 -1N7Q 5.8 HYSA_STRPN
15 PsiBlast_PDB 93.7737% -28 - C1 -1OJO 5.0 HYSA_STRPN
13 PsiBlast_PDB 93.7637% -28 - C1 -1LOH 6.6 HYSA_STRPN
6 PsiBlast_PDB 93.6937% -27 - C1 -1F9G 2.0 HYSA_STRPN
14 PsiBlast_PDB 93.5837% -28 - C1 -1LXK 8.7 HYSA_STRPN
1 PsiBlast_PDB 93.4837% -27 - C1 -1F1S - HYSA_STRA3 -
4 PsiBlast_PDB 93.4537% -27 - C1 -1OJM 5.3 HYSA_STRPN
22 HHSearch 93.4438% -26 - C1 -1N7O - HYSA_STRPN -
10 PsiBlast_PDB 93.4237% -27 - C1 -2BRP 3.3 HYSA_STRPN
21 PsiBlast_CBE 93.4037% -29 - C1 -2BRW - HYSA_STRPN -
37 Fugue 93.1137% -23 - C1 -1EGU - HYSA_STRPN -
17 PsiBlast_PDB 93.1036% -28 - C1 -1N7P - HYSA_STRPN -
19 PsiBlast_PDB 92.9436% -29 - C1 -1N7R 3.7 HYSA_STRPN
9 PsiBlast_PDB 92.8937% -28 - C1 -1W3Y 3.5 HYSA_STRPN
11 PsiBlast_PDB 91.5937% -27 - C1 -2BRV 3.2 HYSA_STRPN