@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA2066: (2016-03-31 )
MKQFEIVIEPIQTEQYREFTINEYQGAVVVFTGHVREWTKGVKTEYLEYEAYIPMAEKKLAQIGDEINEKWPGTITSIVHRIGPLQISDIAVLIAVSSPHRKDAYRANEYAIERIKEIVPIWKKEIWEDGSKWQGHQKGNYEEAKREE

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_B_13(1NVJ)
MOAE_ECOLI
[Raw transfer]




8CS_H_11(2QIE)
MOAE_STAAN
[Raw transfer]




8CS_K_12(2QIE)
MOAE_STAAN
[Raw transfer]




8CS_E_10(2QIE)
MOAE_STAAN
[Raw transfer]




8CS_A_9(2QIE)
MOAE_STAAN
[Raw transfer]




GOL_D_3(2Q5W)
MOAE_STAAN
[Raw transfer]




GOL_D_3(2Q5W)
MOAE_STAAN
[Raw transfer]




GOL_B_9(2OMD)
MOAE_AQUAE
[Raw transfer]




FMT_F_21(1NVJ)
MOAE_ECOLI
[Raw transfer]




FMT_C_19(1NVJ)
MOAE_ECOLI
[Raw transfer]




FMT_E_22(1NVJ)
MOAE_ECOLI
[Raw transfer]




FMT_D_24(1NVJ)
MOAE_ECOLI
[Raw transfer]




FMT_B_23(1NVJ)
MOAE_ECOLI
[Raw transfer]




TRS_A_6(2OMD)
MOAE_AQUAE
[Raw transfer]




TRS_A_6(2OMD)
MOAE_AQUAE
[Raw transfer]




21 PsiBlast_CBE 97.48100%-114 - C3 -2QIE 4.1 MOAE_STAAN
23 PsiBlast_CBE 96.90100%-106 - C3 -2QIE 3.5 MOAE_STAAN
22 PsiBlast_CBE 96.78100%-114 - C3 -2QIE 3.8 MOAE_STAAN
1 PsiBlast_PDB 96.41100%-105 - C3 -2QIE 4.1 MOAE_STAAN
34 HHSearch 95.16100%-104 - C3 -2Q5W 2.0 MOAE_STAAN
2 PsiBlast_PDB 95.16100%-104 - C3 -2Q5W 2.0 MOAE_STAAN
32 PsiBlast_CBE 76.2836% -92 - C3 -1NVJ 3.2 MOAE_ECOLI
31 PsiBlast_CBE 75.0736% -93 - C3 -1NVJ 2.4 MOAE_ECOLI
9 PsiBlast_PDB 74.6236%-103 - C3 -1NVJ Error MOAE_ECOLI
28 PsiBlast_CBE 74.6036% -97 - C3 -1NVJ 3.1 MOAE_ECOLI
6 PsiBlast_PDB 74.4834% -68 - C3 -1FMA - MOAE_ECOLI -
29 PsiBlast_CBE 74.3536%-105 - C3 -1NVJ 3.0 MOAE_ECOLI
7 PsiBlast_PDB 74.1034% -74 - C3 -1NVI - MOAE_ECOLI -
5 PsiBlast_PDB 74.0234% -75 - C3 -1FM0 - MOAE_ECOLI -
30 PsiBlast_CBE 73.9436% -91 - C3 -1NVJ 3.2 MOAE_ECOLI
25 PsiBlast_CBE 73.5840% -93 - C3 -4AP8 - MOC2B_HUMAN -
24 PsiBlast_CBE 72.9140% -95 - C3 -4AP8 - MOC2B_HUMAN -
26 PsiBlast_CBE 72.8840% -92 - C3 -4AP8 - MOC2B_HUMAN -
3 PsiBlast_PDB 72.7540% -92 - C3 -4AP8 - MOC2B_HUMAN -
36 HHSearch 72.5236% -94 * C3 *2WP4 - MOAE1_MYCTU -
33 PsiBlast_CBE 70.2737% -82 - C3 -2OMD 2.1 MOAE_AQUAE
37 HHSearch 69.5333% -85 - C3 -2OMD 2.4 MOAE_AQUAE
10 PsiBlast_PDB 69.2237% -89 - C3 -2OMD 2.4 MOAE_AQUAE