@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA2078: (2016-04-01 )
MTKKVYFNHDGGVDDLVSLFLLLQMENVQLIGVSTIGADCYLEPSLSASVKIINRFSNEDIQVAPSYERGKNPFPKEWRMHAFFMDALPILNEPVKHVASNVSDKEAFEDIIQTLKRQSEKVTLLFTGPLTDLAKALQKDSSIVQYIEKLVWMGGTFLPKGNVEEPEHDGSAEWNAYWDPEAVKIVFDSDIEIDMVALESTNQVPLTLDVRQRWANERQYTGIDFLGVSYAAVPPLTHFITNSTYFLWDVLTTAYIGNKDLVHSIEKKVDVISYGPSQGKTFECKDGRKINVINHVDNNAFFDYITALAKKVN

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

MBY_A_6(4I73)
?
[Raw transfer]



IMH_B_6(2FF1)
?
[Raw transfer]



IMH_A_6(2FF2)
?
[Raw transfer]



MBY_C_18(4I73)
?
[Raw transfer]



IMH_B_7(3B9G)
?
[Raw transfer]



IMH_B_7(2FF2)
?
[Raw transfer]



UA2_B_12(4I72)
?
[Raw transfer]



IMQ_B_7(3EPX)
?
[Raw transfer]



IMQ_A_4(3EPX)
?
[Raw transfer]



AD3_A_5(1HP0)
?
[Raw transfer]



AD3_B_6(1HP0)
?
[Raw transfer]



MBY_A_9(4I74)
?
[Raw transfer]



MBY_B_14(4I73)
?
[Raw transfer]



JMQ_A_4(3EPW)
?
[Raw transfer]



JMQ_B_7(3EPW)
?
[Raw transfer]



JMQ_A_4(3EPW)
?
[Raw transfer]



UA2_A_4(4I72)
?
[Raw transfer]



NOS_A_6(1KIC)
?
[Raw transfer]



IMH_A_6(3B9G)
?
[Raw transfer]



RIB_A_4(2C40)
?
[Raw transfer]



RIB_A_4(2C40)
?
[Raw transfer]



RIB_B_6(2C40)
?
[Raw transfer]



TRS_A_5(4I75)
?
[Raw transfer]



TRS_B_18(4I75)
?
[Raw transfer]
21 PsiBlast_CBE 94.8563% -97 - C1 -2C40 3.6 ?
41 HHSearch 94.1264% -97 - C1 -2C40 3.6 ?
1 PsiBlast_PDB 93.8063% -98 - C1 -2C40 3.6 ?
44 HHSearch 71.2032% -82 * C1 *3EPW 6.1 ?
5 PsiBlast_PDB 71.1633% -85 - C1 -2FF2 6.1 ?
22 PsiBlast_CBE 70.9033% -86 - C1 -3EPX 7.1 ?
23 PsiBlast_CBE 70.8433% -87 - C1 -3EPW 6.1 ?
3 PsiBlast_PDB 70.0233% -88 - C1 -3EPX 7.6 ?
24 PsiBlast_CBE 69.1233% -87 - C1 -2FF2 5.8 ?
4 PsiBlast_PDB 69.0033% -89 - C1 -1HP0 6.1 ?
2 PsiBlast_PDB 68.8433% -86 - C1 -3EPW 6.1 ?
26 PsiBlast_CBE 68.4533% -88 - C1 -1HP0 6.5 ?
27 PsiBlast_CBE 68.2233% -85 - C1 -3B9G 5.9 ?
25 PsiBlast_CBE 68.2033% -87 - C1 -2FF1 5.7 ?
7 PsiBlast_PDB 68.1033% -86 - C1 -3B9G 5.6 ?
6 PsiBlast_PDB 68.0633% -89 - C1 -1KIC 5.3 ?
8 PsiBlast_PDB 67.8733% -86 - C1 -4I70 - ? -
32 PsiBlast_CBE 67.6833% -83 - C1 -4I72 6.1 ?
11 PsiBlast_PDB 67.6433% -84 - C1 -4I73 5.7 ?
10 PsiBlast_PDB 67.6433% -84 - C1 -4I72 5.6 ?
13 PsiBlast_PDB 66.5033% -84 - C1 -4I75 3.0 ?
30 PsiBlast_CBE 66.2633% -83 - C1 -4I73 5.6 ?
28 PsiBlast_CBE 66.1233% -83 - C1 -4I75 3.0 ?
12 PsiBlast_PDB 66.0033% -82 - C1 -4I74 5.7 ?
31 PsiBlast_CBE 65.7933% -83 - C1 -4I73 6.0 ?