@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA2104: (2016-04-01 )
MTDKTLQQIDKLICSWLKQIDNVIPQLIMEMTTETKRHRFDLVTNVDKQIQQQFQQFLATHFPEHQLLAEEKSNEMITNEINHLWIMDPIDGTANLVKQQEDYCIILAYFYEGKPMLSYVYDYPHKKLYKAIRGEGAFCNGIKMEEPPSLKLEDAIISFNAQVMNLDTVQDLFDASFSYRLVGACGLDSMRVAKGQFGAHINTNPKPWDIAAQFLFAELLNLKMTTLDGKAIDHLKGAPFIISNKACHETVLKILNANGGYQKYR

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GD_A_3(1IMB)
IMPA1_HUMAN
[Raw transfer]



GD_A_5(2HHM)
IMPA1_HUMAN
[Raw transfer]



GOL_B_12(4PTK)
?
[Raw transfer]



GOL_B_14(4G61)
?
[Raw transfer]



GOL_A_6(4I40)
?
[Raw transfer]



GOL_A_7(4PTK)
?
[Raw transfer]



GOL_B_13(4I3Y)
?
[Raw transfer]



GOL_B_10(4I3E)
?
[Raw transfer]



GOL_B_12(4I40)
?
[Raw transfer]



GOL_A_5(4I3E)
?
[Raw transfer]



GOL_A_5(4I3Y)
?
[Raw transfer]



GOL_A_7(4G61)
?
[Raw transfer]



SRT_C_11(3RYD)
?
[Raw transfer]



SRT_A_8(3RYD)
?
[Raw transfer]
7 PsiBlast_PDB 97.6399%-127 - C3 -4PTK 3.4 ?
4 PsiBlast_PDB 97.5699%-130 - C3 -4I3Y 3.4 ?
22 PsiBlast_CBE 97.1899%-131 - C3 -4PTK 2.4 ?
1 PsiBlast_PDB 97.1899%-136 - C3 -3QMF - ? -
6 PsiBlast_PDB 97.1599%-133 - C3 -4I3E 3.0 ?
23 PsiBlast_CBE 97.1499%-131 - C3 -4I40 3.2 ?
26 PsiBlast_CBE 96.9899%-127 - C3 -4G61 3.3 ?
3 PsiBlast_PDB 96.8799%-127 - C3 -4G61 3.2 ?
24 PsiBlast_CBE 96.8699%-129 - C3 -4I3Y 2.3 ?
5 PsiBlast_PDB 96.5199%-126 - C3 -4I40 3.1 ?
25 PsiBlast_CBE 96.3799%-126 - C3 -4I3E 2.9 ?
2 PsiBlast_PDB 96.0299%-128 - C3 -3RYD 3.1 ?
21 PsiBlast_CBE 95.3899%-130 - C3 -3RYD 2.9 ?
27 HHSearch 66.3528%-111 - C3 -3T0J - ? -
33 HHSearch 66.0223% -97 - C3 -2BJI - IMPA1_BOVIN -
11 PsiBlast_PDB 64.9827% -96 - C3 -2P3V - BSUHB_THEMA -
30 HHSearch 63.7726% -93 - C3 -2P3N - BSUHB_THEMA -
28 HHSearch 61.2422%-104 - C3 -2FVZ - IMPA2_HUMAN -
32 HHSearch 61.1822%-100 - C3 -2QFL - SUHB_ECOLI -
38 HHSearch 61.1320% -99 - C3 -1JP4 - BPNT1_RAT -