@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA2172: (2016-04-01 )
MALFKRKISLPMQVVIALVLGVVVGLLLYGQENVANYIKPFGDVFLNLIKMIVIPVVFCSLALSISNVGESKTVGRYGWKTILYFEIITTIAIGLGIIFGNLFKPGAGLDPTKLPKGDISKYQSTAHAAEQSTYGNHFIDTIVHIIPTNFFEALNKGELLPIIFFAVFFGLGLAAVGKKAEPVKEFLSGSLEAVFWMINKILKLAPLGVFAFICTTIITFGASALLPLLKLVLVVVFAMVFFVFAILGLVAWMCGINIMNIIRILKSELLLAFSTSSSEAVLPVMMKKMENFGSPKEITSFVIPIGYTFNLDGSALYQSIAALFVAQMYGMHLTLSEQIVLMLTLMITSKGMAAVPGTSIVVLLTTLGAMGLPAQGLALIIGVDRILDMVRTCVNVIGNALSTIVIAKWENVYDKAKGQEYLKSI

Atome Classification :

(32 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

TB1_F_6(2NWW)
?
[Raw transfer]



TB1_E_5(2NWW)
?
[Raw transfer]



ASP_B_8(3V8F)
?
[Raw transfer]



ASP_B_5(3KBC)
?
[Raw transfer]



ASP_C_6(3KBC)
?
[Raw transfer]



ASP_C_12(3V8F)
?
[Raw transfer]



ASP_C_14(4IZM)
?
[Raw transfer]



ASP_B_10(4IZM)
?
[Raw transfer]



ASP_B_7(4X2S)
?
[Raw transfer]



ASP_C_10(4X2S)
?
[Raw transfer]



ASP_A_10(2NWX)
?
[Raw transfer]



ASP_A_10(2NWX)
?
[Raw transfer]



ASP_D_4(2NWL)
?
[Raw transfer]



ASP_D_4(2NWL)
?
[Raw transfer]



ASP_D_4(2NWL)
?
[Raw transfer]



ASP_D_4(2NWL)
?
[Raw transfer]
38 PsiBlast_CBE 98.1835%-173 - C15 -4P3J - ? -
40 PsiBlast_CBE 97.9535%-171 - C15 -4P1A - ? -
41 PsiBlast_CBE 97.6735%-170 - C15 -4P1A - ? -
43 PsiBlast_CBE 97.6535%-171 - C15 -4P19 - ? -
42 PsiBlast_CBE 97.4535%-171 - C15 -4P19 - ? -
8 PsiBlast_PDB 97.4535%-172 - C15 -4P19 - ? -
39 PsiBlast_CBE 97.3335%-173 - C15 -4P3J - ? -
113 Fugue 97.0937%-164 - C15 -4OYF - ? -
9 PsiBlast_PDB 96.9035%-171 - C15 -4P1A - ? -
49 PsiBlast_CBE 96.8934%-163 - C15 -4OYG - ? -
50 PsiBlast_CBE 96.8634%-162 - C15 -4OYG - ? -
53 PsiBlast_CBE 96.7834%-163 - C15 -4OYG - ? -
58 PsiBlast_CBE 96.7535%-166 - C15 -4KY0 - ? -
13 PsiBlast_PDB 96.7534%-163 - C15 -4OYG - ? -
34 PsiBlast_CBE 96.7435%-167 - C15 -3KBC 3.4 ?
24 PsiBlast_CBE 96.6335%-167 - C15 -3V8F 2.7 ?
51 PsiBlast_CBE 96.5434%-162 - C15 -4OYG - ? -
35 PsiBlast_CBE 96.4635%-167 - C15 -3KBC 3.4 ?
23 PsiBlast_CBE 96.2935%-167 - C15 -3V8F 2.6 ?
10 PsiBlast_PDB 96.2135%-172 - C15 -4P3J - ? -
32 PsiBlast_CBE 95.9935%-164 - C15 -2NWW 3.9 ?
33 PsiBlast_CBE 95.3935%-165 - C15 -2NWW 3.4 ?
31 PsiBlast_CBE 95.0035%-167 - C15 -2NWX 4.1 ?
21 PsiBlast_CBE 94.7635%-169 - C15 -4X2S 3.4 ?
22 PsiBlast_CBE 94.3035%-169 - C15 -4X2S 3.0 ?
122 HHSearch 94.1335%-167 * C15 *2NWL 4.4 ?
30 PsiBlast_CBE 93.7435%-164 - C15 -2NWX 4.1 ?
54 PsiBlast_CBE 92.9534%-156 - C15 -4IZM 5.2 ?
16 PsiBlast_PDB 92.4734%-166 - C15 -2NWL 4.4 ?
56 PsiBlast_CBE 92.4634%-165 - C15 -2NWL 3.9 ?
57 PsiBlast_CBE 92.4134%-168 - C15 -2NWL 4.0 ?
55 PsiBlast_CBE 92.3734%-155 - C15 -4IZM 3.1 ?