@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA2188: (2016-04-01 )
MAKQKLVMIGNGMAGIRTIEEILERANDLYDITVIGKEPYPNYNRIMLSNILQNKMTVEETIMNPYEWYEEHGIELITNDPVIEVDRANQSVTTANGIEVSYDKLIFATGSKAFVIPVPGSTLPSVIGWRTIDDTEQMMNIAKTKKKAIVIGGGLLGLECARGLLDQGMEVTVLHLAEWLMEMQLDRKAGNMLKADLEKQGMKFEMQANTTEILGEDDVEGVKLADGREIPADLVVMAVGIRPYTEVAKESGLDVNRGIVVNDVMQTSDSNVYAVGECAEHNGKVYGLVAPLYEQGKVLADHLTNKETNGYKGSTTFTSLKVSGCDLYSAGQIVENAEIKGIEIFNSVDNNYKKIFLKDGNVVGAVLYGDIDDGSRFYNMMKKGESTEDYTLVSLLTKGGEEASLSIADMADDETICGCNGVDKGTIVNAITENGFTTVEEVTAKTKAGNSCGKCKPQIAQILQHTLGDDFVAAKPAGICGCTDLTRDQIVTQIRAKGLKTSKEVRHVLNFKNKGGCPKCRPAINYYLNMVYPHDHEDERESRFANERYHANIQNDGTFSVIPQMRGGVTDADQLIRLGEVAKKYHVPLVKVTGSQRVGLYGVKKEELPNIWEDLGMRSASAYGKKTRSVKSCVGKEFCRFGTQYTTRLGIRLEKTFEYIDTPHKFKMGVSGCPRSCVESGVKDFGIISVENGFQIYIGGNGGTEVEKAEFLTTVETEDEVIKLCGALMQYYRETGIYAERTAPWLRRLGFENVKEVLLDPERQNELFERIMDAKKAVEAEPWEAITSNAQARKIFEVEKV

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FMT_A_9(4H4P)
?
[Raw transfer]
2 PsiBlast_PDB 91.0530% -90 - C1 -3KLJ - NROR_CLOAB -
27 HHSearch 90.0331% -87 - C1 -3KLJ - NROR_CLOAB -
1 PsiBlast_PDB 89.7733% -91 - C1 -1XHC - ? -
50 Fugue 89.3025% -80 - C1 -1M6I - AIFM1_HUMAN -
38 HHSearch 88.0625% -74 - C1 -3NTD - ? -
31 HHSearch 87.9831% -96 - C1 -1XHC - ? -
42 HHSearch 87.5724% -81 - C1 -1M6I - AIFM1_HUMAN -
36 HHSearch 83.9627% -75 * C1 *3FG2 - ? -
28 HHSearch 83.9625% -76 - C1 -3EF6 - TODA_PSEP1 -
34 HHSearch 83.8125% -78 - C1 -3LXD - ? -
30 HHSearch 82.7428% -79 - C1 -2V3A - RURE_PSEAE -
41 HHSearch 81.4121% -78 - C1 -3ICS - ? -
4 PsiBlast_PDB 80.8330% -89 - C1 -3FG2 - ? -
17 PsiBlast_PDB 79.9924% -70 - C1 -2GR3 - ? -
33 HHSearch 79.8022% -78 - C1 -1NHP - NAPE_ENTFA -
29 HHSearch 79.5723% -75 - C1 -2GQW - ? -
37 HHSearch 77.6422% -76 - C1 -3CGB - ? -
19 PsiBlast_PDB 77.5824% -73 - C1 -4H4P 3.1 ?
20 PsiBlast_PDB 77.2124% -73 - C1 -4H4S - ? -
16 PsiBlast_PDB 77.1024% -74 - C1 -4H4Z - ? -