@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA2214: (2016-04-02 )
MNYTQQLKQKDSEYVWHPFTQMGVYSKEEAIIIEKGKGSYLYDTNGNKYLDGYASLWVNVHGHNNKYLNKVIKKQLNKIAHSTLLGSSNIPSIELAEKLIEITPSNLRKVFYSDTGSASVEIAIKMAYQYWKNIDREKYAKKNKFITLNHGYHGDTIGAVSVGGIKTFHKIFKDLIFENIQVESPSFYRSNYDTENEIMTAILTNIEQILIERNDEIAGFILEPLIQGATGLFVHPKGFLKEVEKLCKKYDVLLICDEVAVGFGRTGKMFACNHEDVQPDIMCLGKAITGGYLPLAATLTSQKIYNTFLSDSHGVNTFFHGHTYTGNQIVCTVALENIRLYEKRKLLSHIETTSSTLEKQLHALKRHRNVGDVRGRGLMFGVELVTDKDSKTPLEIEKVERIVRKCKENGLMIRNLENVITFVPVLSMSNKEVKTMVRIFKKAVHNILDRKC

Atome Classification :

(63 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

2B9_B_6(4MQR)
BIOA_MYCTU
[Raw transfer]



2B9_A_3(4MQR)
BIOA_MYCTU
[Raw transfer]



2B6_A_7(4MQQ)
BIOA_MYCTU
[Raw transfer]



2B6_B_8(4MQQ)
BIOA_MYCTU
[Raw transfer]



PXG_A_3(4BA5)
?
[Raw transfer]



2B1_B_6(4MQP)
BIOA_MYCTU
[Raw transfer]



2B1_A_3(4MQP)
BIOA_MYCTU
[Raw transfer]



PL8_A_3(3TFU)
BIOA_MYCTU
[Raw transfer]



PL8_B_4(3TFU)
BIOA_MYCTU
[Raw transfer]



PLP_A_5(1S07)
BIOA_ECOLI
[Raw transfer]



PLP_B_6(1S07)
BIOA_ECOLI
[Raw transfer]



PLP_B_8(1MLZ)
BIOA_ECOLI
[Raw transfer]



PLP_B_8(1MLY)
BIOA_ECOLI
[Raw transfer]



PLP_A_5(1MGV)
BIOA_ECOLI
[Raw transfer]



PLP_A_3(4W1W)
BIOA_MYCTU
[Raw transfer]



PLP_B_10(4W1W)
BIOA_MYCTU
[Raw transfer]



PLP_A_4(4WYF)
?
[Raw transfer]



PLP_B_5(4WYF)
?
[Raw transfer]



PLP_A_3(4W1X)
BIOA_MYCTU
[Raw transfer]



PLP_B_8(1DTY)
BIOA_ECOLI
[Raw transfer]



PLP_B_5(3TFT)
BIOA_MYCTU
[Raw transfer]



PLP_A_3(3LV2)
BIOA_MYCTU
[Raw transfer]



PLP_B_5(3LV2)
BIOA_MYCTU
[Raw transfer]



PLP_B_8(4WYE)
?
[Raw transfer]



PLP_A_3(4WYC)
?
[Raw transfer]



PLP_A_3(3TFT)
BIOA_MYCTU
[Raw transfer]



PLP_B_6(1MGV)
BIOA_ECOLI
[Raw transfer]



PLP_A_3(4CXQ)
BIOA_MYCTU
[Raw transfer]



PLP_B_8(4CXQ)
BIOA_MYCTU
[Raw transfer]



PLP_B_13(4WYD)
?
[Raw transfer]



PLP_A_3(4WYD)
?
[Raw transfer]



PLP_A_7(1DTY)
BIOA_ECOLI
[Raw transfer]



PLP_B_6(1QJ5)
BIOA_ECOLI
[Raw transfer]



PLP_A_3(3BV0)
BIOA_MYCTU
[Raw transfer]



PLP_B_7(4CXR)
BIOA_MYCTU
[Raw transfer]



PLP_A_7(1DTY)
BIOA_ECOLI
[Raw transfer]



PLP_A_3(4CXR)
BIOA_MYCTU
[Raw transfer]



PLP_A_3(4WYG)
?
[Raw transfer]



PLP_B_10(4WYG)
?
[Raw transfer]



PLP_B_4(3BV0)
BIOA_MYCTU
[Raw transfer]



PLP_B_8(4WYC)
?
[Raw transfer]



PLP_A_3(4WYE)
?
[Raw transfer]



PLP_B_4(3DOD)
BIOK_BACSU
[Raw transfer]



KAP_A_4(4CXQ)
BIOA_MYCTU
[Raw transfer]



TA8_A_3(4A6R)
?
[Raw transfer]



TA8_B_4(4A6R)
?
[Raw transfer]



3GS_A_4(4W1V)
BIOA_MYCTU
[Raw transfer]



ACZ_B_4(1MLY)
BIOA_ECOLI
[Raw transfer]



IPA_A_7(1MGV)
BIOA_ECOLI
[Raw transfer]



3GS_B_7(4W1V)
BIOA_MYCTU
[Raw transfer]



40N_B_6(4XEW)
?
[Raw transfer]



IPA_B_7(1S07)
BIOA_ECOLI
[Raw transfer]



3G9_B_7(4W1X)
BIOA_MYCTU
[Raw transfer]



3VS_A_4(4WYC)
?
[Raw transfer]



40N_A_4(4XEW)
?
[Raw transfer]
21 PsiBlast_CBE 94.4748% -96 - C1 -3DOD 4.4 BIOK_BACSU
87 HHSearch 94.0248% -99 - C1 -3DOD - BIOK_BACSU -
1 PsiBlast_PDB 93.1648% -95 - C1 -3DOD - BIOK_BACSU -
2 PsiBlast_PDB 93.1248% -93 - C1 -3DRD - BIOK_BACSU -
93 HHSearch 79.0134% -87 - C1 -3N5M - ? -
62 PsiBlast_CBE 75.7631% -86 - C1 -4AH3 - ? -
59 PsiBlast_CBE 75.5431% -89 - C1 -4BA4 - ? -
60 PsiBlast_CBE 75.3031% -86 - C1 -4AH3 - ? -
61 PsiBlast_CBE 75.1931% -83 - C1 -4AH3 - ? -
67 PsiBlast_CBE 74.9131% -82 - C1 -4A6T - ? -
109 Fugue 74.8433% -93 - C1 -1DTY 3.4 BIOA_ECOLI
24 PsiBlast_CBE 74.8432% -88 - C1 -1MLZ 3.2 BIOA_ECOLI
68 PsiBlast_CBE 74.7231% -84 - C1 -4A6T - ? -
58 PsiBlast_CBE 74.5231% -88 - C1 -4BA5 6.1 ?
4 PsiBlast_PDB 74.5032% -85 - C1 -1MGV 3.5 BIOA_ECOLI
70 PsiBlast_CBE 74.2731% -83 - C1 -4A6T - ? -
23 PsiBlast_CBE 74.1732% -88 - C1 -1QJ5 4.1 BIOA_ECOLI
63 PsiBlast_CBE 73.8131% -82 - C1 -4AH3 - ? -
69 PsiBlast_CBE 73.8031% -83 - C1 -4A6T - ? -
25 PsiBlast_CBE 73.7532% -87 - C1 -1MLY 4.4 BIOA_ECOLI
27 PsiBlast_CBE 72.6232% -85 - C1 -1MGV 4.4 BIOA_ECOLI
5 PsiBlast_PDB 72.3132% -86 - C1 -1S07 3.5 BIOA_ECOLI
26 PsiBlast_CBE 71.5932% -85 - C1 -1S07 4.0 BIOA_ECOLI
71 PsiBlast_CBE 71.5731% -85 - C1 -4A6R 3.8 ?
72 PsiBlast_CBE 71.5531% -85 - C1 -4A6R 3.8 ?
22 PsiBlast_CBE 70.4232% -84 - C1 -1DTY 3.3 BIOA_ECOLI
3 PsiBlast_PDB 69.8132% -82 - C1 -1DTY 3.4 BIOA_ECOLI
49 PsiBlast_CBE 68.9032% -84 - C1 -4CXR 3.5 BIOA_MYCTU
14 PsiBlast_PDB 68.7632% -85 - C1 -4CXR 3.1 BIOA_MYCTU
33 PsiBlast_CBE 68.4832% -86 - C1 -4W1W 3.5 BIOA_MYCTU
6 PsiBlast_PDB 68.0532% -85 - C1 -4W1V 1.9 BIOA_MYCTU
36 PsiBlast_CBE 67.9532% -83 - C1 -4WYF 3.3 ?
40 PsiBlast_CBE 67.9332% -84 - C1 -4WYC 3.2 ?
37 PsiBlast_CBE 67.9332% -83 - C1 -4WYE 3.7 ?
52 PsiBlast_CBE 67.7632% -84 - C1 -3TFT 3.6 BIOA_MYCTU
8 PsiBlast_PDB 67.5732% -86 - C1 -3TFT 3.5 BIOA_MYCTU
45 PsiBlast_CBE 67.3532% -86 - C1 -4W1X 4.1 BIOA_MYCTU
47 PsiBlast_CBE 67.2332% -83 - C1 -4MQQ 6.7 BIOA_MYCTU
50 PsiBlast_CBE 67.2032% -82 - C1 -4CXQ 3.5 BIOA_MYCTU
38 PsiBlast_CBE 67.2032% -82 - C1 -4WYD 3.2 ?
13 PsiBlast_PDB 67.0332% -81 - C1 -4CXQ 3.5 BIOA_MYCTU
32 PsiBlast_CBE 66.9932% -83 - C1 -4W1V 3.3 BIOA_MYCTU
10 PsiBlast_PDB 66.9532% -84 - C1 -4MQP 6.6 BIOA_MYCTU
35 PsiBlast_CBE 66.9032% -83 - C1 -4WYG 3.3 ?
11 PsiBlast_PDB 66.7032% -83 - C1 -4MQQ 6.7 BIOA_MYCTU
48 PsiBlast_CBE 66.6032% -84 - C1 -4MQP 6.5 BIOA_MYCTU
54 PsiBlast_CBE 66.1631% -85 - C1 -3BV0 3.2 BIOA_MYCTU
15 PsiBlast_PDB 66.1332% -84 - C1 -4W1X 3.4 BIOA_MYCTU
12 PsiBlast_PDB 65.8832% -85 - C1 -4MQR 6.0 BIOA_MYCTU
46 PsiBlast_CBE 65.7332% -86 - C1 -4MQR 5.6 BIOA_MYCTU
19 PsiBlast_PDB 65.5632% -80 - C1 -4WYG 4.5 ?
16 PsiBlast_PDB 65.5432% -81 - C1 -4WYC 3.2 ?
34 PsiBlast_CBE 65.5332% -83 - C1 -4XEW 3.7 ?
7 PsiBlast_PDB 65.5132% -82 - C1 -4W1W 3.2 BIOA_MYCTU
39 PsiBlast_CBE 65.4332% -81 - C1 -4WYD 3.0 ?
17 PsiBlast_PDB 65.2632% -83 - C1 -4WYE 2.6 ?
56 PsiBlast_CBE 65.0831% -83 - C1 -3LV2 3.1 BIOA_MYCTU
9 PsiBlast_PDB 65.0732% -82 - C1 -3TFU 5.4 BIOA_MYCTU
55 PsiBlast_CBE 64.8431% -85 - C1 -3LV2 3.3 BIOA_MYCTU
53 PsiBlast_CBE 64.5631% -81 - C1 -3BV0 3.2 BIOA_MYCTU
51 PsiBlast_CBE 64.5132% -84 - C1 -3TFU 5.6 BIOA_MYCTU
18 PsiBlast_PDB 64.2732% -83 - C1 -4WYF 3.0 ?
20 PsiBlast_PDB 63.3332% -81 - C1 -4XEW 4.3 ?