@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA2217: (2016-04-02 )
MNNQTNWIKILSGFASDSKWKIMLSILLSIISVFSGLVPYWAVFKIILMMINNAYTINSIMVYIFIALITYISQVCCFGASTMLSHITAYEILSEIRKKLAQKLMRLPLGVVESKKIGELKNIFVDKVETIELPLAHMIPEVIGNLLLSAAIFLYIMLIDWRMASALLVTIPISIFAFKKVMSGFNETYAEQMKSNNYMNSAIVEFIEGIEVIKTFNQSQSSYKKYKDAVDNYKIHTLNWFKNTWGYMNLGASVLPSTFLGILPVGMYLISINQLNYAEFFLCIVLSLGVVAPIKNFTNYVNHLKSIQYALTEVNQILSLEELVLSTKFKKPQHYEIAFNNVGFSYNKDKDDLVFKHLSFTVPENNFTAIVGASGSGKSTIAKLISRYWDVTSGEITIGGINIKDIESKQLNDLVGFVGQDNFLLNLTFKENIKLGNPEATDEAVEKAAKLAQCHEFIEKLPDGYDTNVGTVGDKLSGGEKQRVTIARMILKDAPIIVLDEATAYVDPDNEQKIQEALNVLTQDKTLIVIAHRLSTIQHADQIIVLGKQQILEKGSHHLLLKLNGNYKKMWDTHMHTKDWGINTGHN

Atome Classification :

(55 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_H_8(2FGJ)

[Raw transfer]




ATP_F_6(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_C_11(1XEF)
HLYBP_ECOLX
[Raw transfer]




ATP_G_7(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_H_8(2FGK)

[Raw transfer]




ATP_D_12(1XEF)

[Raw transfer]




ATP_E_5(2FGJ)
HLYBP_ECOLX
[Raw transfer]




ANP_A_3(4PL0)
MCJD_ECOLX
[Raw transfer]




ATP_C_9(1MV5)
LMRA_LACLA
[Raw transfer]




ATP_E_5(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_A_7(1MV5)
LMRA_LACLA
[Raw transfer]




128_A_2(2PMK)

[Raw transfer]




ATP_B_8(2IXF)
TAP1_RAT
[Raw transfer]




ATP_F_6(2FGJ)
HLYBP_ECOLX
[Raw transfer]




ATP_A_9(1XEF)
HLYBP_ECOLX
[Raw transfer]




ATP_A_7(1MV5)
LMRA_LACLA
[Raw transfer]




ADP_A_3(3NHA)

[Raw transfer]




ANP_B_6(4PL0)
MCJD_ECOLX
[Raw transfer]




ATP_A_3(3VX4)
?
[Raw transfer]




ATP_A_5(2IXF)
TAP1_RAT
[Raw transfer]




ATP_D_5(3VX4)
?
[Raw transfer]




ADP_B_2(2FFA)

[Raw transfer]




ADP_B_2(2FF7)

[Raw transfer]




ADP_A_2(3NHB)

[Raw transfer]




ADP_B_2(2FF7)

[Raw transfer]




12D_A_2(3B5J)

[Raw transfer]




AGS_A_3(4S0F)
?
[Raw transfer]




ATP_B_10(1XEF)
HLYBP_ECOLX
[Raw transfer]




ATP_A_3(3VX4)
?
[Raw transfer]




ADP_B_2(2FFB)

[Raw transfer]




ATP_A_2(3NH9)

[Raw transfer]




ADP_B_8(1MV5)
LMRA_LACLA
[Raw transfer]




ATP_G_7(2FGJ)
HLYBP_ECOLX
[Raw transfer]




ADP_D_10(1MV5)

[Raw transfer]




ADP_A_3(1JJ7)

[Raw transfer]




AGS_B_4(4S0F)
?
[Raw transfer]




ATP_A_7(4YMU)
?
[Raw transfer]




22 PsiBlast_CBE 86.6732%-106 - C2 -2HYD - Y1866_STAAM -
2 PsiBlast_PDB 86.5532%-105 - C2 -2ONJ - Y1866_STAAM -
1 PsiBlast_PDB 86.5532%-106 - C2 -2HYD - Y1866_STAAM -
21 PsiBlast_CBE 86.3032%-106 - C2 -2ONJ - Y1866_STAAM -
13 PsiBlast_PDB 85.2630%-116 - C2 -4MYH - ATM1_YEAST -
12 PsiBlast_PDB 84.9030%-117 - C2 -4MYC - ATM1_YEAST -
4 PsiBlast_PDB 84.1729%-115 - C2 -3QF4 - Y288_THEMA -
6 PsiBlast_PDB 83.9829%-116 - C2 -4Q4H - Y288_THEMA -
7 PsiBlast_PDB 83.1729%-116 - C2 -4Q4J - Y288_THEMA -
5 PsiBlast_PDB 82.3929%-115 - C2 -4Q4A - Y288_THEMA -
84 HHSearch 79.0424%-109 - C2 -3WMG - ? -
14 PsiBlast_PDB 77.9427%-111 - C2 -4F4C - PGP1_CAEEL -
83 HHSearch 75.9624%-111 - C2 -3ZDQ - ABCBA_HUMAN -
3 PsiBlast_PDB 74.8732%-105 - C2 -4A82 - Y1866_STAAM -
10 PsiBlast_PDB 74.0334% -85 - C2 -4S0F 3.1 ?
23 PsiBlast_CBE 73.6734% -87 - C2 -4S0F 1.3 ?
75 Fugue 73.2225%-105 - C2 -4F4C - PGP1_CAEEL -
81 HHSearch 72.7723% -95 - C2 -3B60 - MSBA_SALTY -
9 PsiBlast_PDB 72.3734% -96 - C2 -4RY2 - ? -
72 Fugue 71.8323% -96 - C2 -3B60 - MSBA_SALTY -
45 PsiBlast_CBE 63.5840%-100 - C2 -1XEF 7.1 HLYBP_ECOLX
18 PsiBlast_PDB 63.4846% -89 - C2 -3NHA 5.8
17 PsiBlast_PDB 63.3446% -87 - C2 -3NH9 6.2
19 PsiBlast_PDB 63.1946% -93 - C2 -3NHB 5.8
53 PsiBlast_CBE 63.0933% -93 - C2 -2IXF 7.8 TAP1_RAT
43 PsiBlast_CBE 62.9040% -94 - C2 -1XEF 7.2
38 PsiBlast_CBE 62.8640% -98 - C2 -2FGJ 6.9
54 PsiBlast_CBE 62.8233% -92 - C2 -2IXF 7.6 TAP1_RAT
46 PsiBlast_CBE 62.2140% -96 - C2 -1XEF 6.7 HLYBP_ECOLX
35 PsiBlast_CBE 61.4540%-101 - C2 -2FGK 7.2 HLYBP_ECOLX
41 PsiBlast_CBE 61.2840% -96 - C2 -2FGJ 6.9 HLYBP_ECOLX
36 PsiBlast_CBE 61.0040% -96 - C2 -2FGK 7.4 HLYBP_ECOLX
33 PsiBlast_CBE 60.9740%-101 - C2 -2FGK 7.1
44 PsiBlast_CBE 60.9340%-101 - C2 -1XEF 7.3 HLYBP_ECOLX
91 HHSearch 60.6140% -99 - C2 -2FF7 6.6
29 PsiBlast_CBE 60.5840%-101 - C2 -3B5J 6.8
34 PsiBlast_CBE 60.3740% -96 - C2 -2FGK 6.8 HLYBP_ECOLX
39 PsiBlast_CBE 60.3040% -93 - C2 -2FGJ 7.4 HLYBP_ECOLX
37 PsiBlast_CBE 60.2440%-101 - C2 -2FFB 6.5
30 PsiBlast_CBE 59.8941%-100 - C2 -2FF7 6.6
40 PsiBlast_CBE 59.8640% -92 - C2 -2FGJ 7.3 HLYBP_ECOLX
28 PsiBlast_CBE 59.8241%-100 - C2 -2PMK 7.0
42 PsiBlast_CBE 59.4640%-101 - C2 -2FFA 6.4
48 PsiBlast_CBE 58.9739% -91 - C2 -1MV5 5.3 LMRA_LACLA
59 PsiBlast_CBE 58.9634% -95 - C2 -3VX4 6.9 ?
58 PsiBlast_CBE 58.7534% -94 - C2 -3VX4 6.0 ?
55 PsiBlast_CBE 58.4633% -87 - C2 -1JJ7 6.1
90 HHSearch 58.0439% -97 - C2 -1MV5 6.3 LMRA_LACLA
87 HHSearch 57.7131% -94 - C2 -3VX4 6.9 ?
50 PsiBlast_CBE 56.4439% -91 - C2 -1MV5 6.2 LMRA_LACLA
49 PsiBlast_CBE 55.5939% -78 - C2 -1MV5 6.3 LMRA_LACLA
47 PsiBlast_CBE 54.3639% -84 - C2 -1MV5 5.1
66 PsiBlast_CBE 53.5831% -85 - C2 -4PL0 6.3 MCJD_ECOLX
67 PsiBlast_CBE 53.3431% -86 - C2 -4PL0 6.6 MCJD_ECOLX
71 PsiBlast_CBE 45.0431% -88 - C2 -4YMU 4.9 ?