@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA2237: (2016-04-02 )
MIMLSIKHLTKIYSGNKKAVDDISLDIQSGEFIAFIGTSGSGKTTALRMINRMIEATEGQIEIDGKDVRSMNPVELRRNIGYVIQQIGLMPHMTIKENIVLVPKLLKWTKEEKDKRAKELIKLVDLPESFLERYPAELSGGQQQRIGVVRALAAEQDIILMDEPFGALDPITRDTLQDLVKTLQRKLGKTFIFVTHDMDEAIKLADKICIMSEGKVVQFDTPDNILRHPANDFVRDFIGQNRLIQDRPNDKTVEGVMIKPITIQADATLNDAVHIMRQKRVDTIFVVDSNNHLLGFLDIEDINQGIRGHKSLRDTMQQHIYTVQIDSKLQDSVRTILKRNVRNVPVVDDKQRLVGLITRANVVDIVYDTIWGDSEDAVQTEHVGEDTVSSKMHEQHTTNVKVRDIGDDKS

Atome Classification :

(46 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_K_6(3C41)
?
[Raw transfer]




ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]




AGS_B_6(3C4J)
?
[Raw transfer]




ATP_B_6(3FVQ)
FBPC_NEIG1
[Raw transfer]




ANP_J_5(3C41)
?
[Raw transfer]




ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]




ATP_B_6(1L2T)
Y796_METJA
[Raw transfer]




AGS_A_4(3C4J)
?
[Raw transfer]




ADP_A_5(2Q0H)
?
[Raw transfer]




ATP_A_7(4YMU)
?
[Raw transfer]




ATP_J_5(4YMU)
?
[Raw transfer]




ADP_B_6(2Q0H)
?
[Raw transfer]




ATP_J_5(4YMV)
?
[Raw transfer]




ADP_A_5(2OLJ)
?
[Raw transfer]




ACP_A_4(4AYT)
ABCBA_HUMAN
[Raw transfer]




ADP_B_6(2OLJ)
?
[Raw transfer]




ATP_A_6(4YMV)
?
[Raw transfer]




ACP_A_4(4AYX)
ABCBA_HUMAN
[Raw transfer]




AT4_A_5(2OLK)
?
[Raw transfer]




AT4_C_7(2OLK)
?
[Raw transfer]




ANP_A_2(4AYW)
ABCBA_HUMAN
[Raw transfer]




AT4_D_8(2OLK)
?
[Raw transfer]




AT4_B_6(2OLK)
?
[Raw transfer]




GOL_B_11(4P33)
LPTB_ECOLI
[Raw transfer]




GOL_A_5(4P33)
LPTB_ECOLI
[Raw transfer]




IPA_A_6(3TIF)
Y796_METJA
[Raw transfer]




4 PsiBlast_PDB 91.3943%-119 - C2 -1V43 - ? -
18 PsiBlast_PDB 90.4037%-106 - C2 -3PUX - MALK_ECOLI -
106 HHSearch 90.3243%-117 - C2 -1V43 - ? -
29 PsiBlast_CBE 90.2737%-113 - C2 -3PUZ - MALK_ECOLI -
3 PsiBlast_PDB 89.8843%-114 - C2 -1VCI - ? -
27 PsiBlast_CBE 89.7937%-104 - C2 -4KI0 - ? -
13 PsiBlast_PDB 89.3437%-108 - C2 -3PUY - MALK_ECOLI -
16 PsiBlast_PDB 89.2137%-106 - C2 -3PUV - MALK_ECOLI -
108 HHSearch 89.0038%-110 - C2 -3RLF - MALK_ECOLI -
105 HHSearch 88.9939%-114 - C2 -1Z47 - ? -
37 PsiBlast_CBE 88.9837%-109 - C2 -2AWN - MALK_ECOLI -
19 PsiBlast_PDB 88.9837%-109 - C2 -3RLF - MALK_ECOLI -
20 PsiBlast_PDB 88.6937%-109 - C2 -4JBW - MALK_ECOLI -
15 PsiBlast_PDB 88.6537%-108 - C2 -3PV0 - MALK_ECOLI -
17 PsiBlast_PDB 88.6137%-107 - C2 -3PUW - MALK_ECOLI -
26 PsiBlast_CBE 88.3837%-105 - C2 -4KI0 - ? -
33 PsiBlast_CBE 88.3637%-106 - C2 -3PUV - MALK_ECOLI -
46 PsiBlast_CBE 88.1033%-106 - C2 -3TUZ - METN_ECOLI -
32 PsiBlast_CBE 88.0337%-108 - C2 -3PUW - MALK_ECOLI -
28 PsiBlast_CBE 88.0237%-105 - C2 -3RLF - MALK_ECOLI -
86 PsiBlast_CBE 87.9839%-109 - C2 -3FVQ 6.9 FBPC_NEIG1
85 PsiBlast_CBE 87.9039%-109 - C2 -3FVQ 7.4 FBPC_NEIG1
76 PsiBlast_CBE 86.6835% -98 - C2 -2OLK 6.2 ?
67 PsiBlast_CBE 86.3235%-101 - C2 -3C4J 5.2 ?
65 PsiBlast_CBE 85.0135% -98 - C2 -3C41 6.9 ?
79 PsiBlast_CBE 84.5435% -95 - C2 -2OLJ 5.9 ?
75 PsiBlast_CBE 84.5035% -92 - C2 -2OLK 6.2 ?
77 PsiBlast_CBE 84.2135% -96 - C2 -2OLK 6.1 ?
68 PsiBlast_CBE 84.1635% -92 - C2 -3C4J 6.6 ?
80 PsiBlast_CBE 83.9235%-101 - C2 -2OLJ 6.6 ?
66 PsiBlast_CBE 83.8335% -94 - C2 -3C41 7.5 ?
78 PsiBlast_CBE 83.8235% -96 - C2 -2OLK 6.2 ?
59 PsiBlast_CBE 83.6239%-100 - C2 -1L2T 6.6 Y796_METJA
92 PsiBlast_CBE 83.1832%-108 - C2 -1B0U 5.8 HISP_SALTY
63 PsiBlast_CBE 83.1436%-104 - C2 -4YMU 5.0 ?
70 PsiBlast_CBE 82.9135% -95 - C2 -2Q0H 5.7 ?
69 PsiBlast_CBE 82.6535% -93 - C2 -2Q0H 6.0 ?
61 PsiBlast_CBE 82.2636% -99 - C2 -4YMV 5.1 ?
81 PsiBlast_CBE 81.9738%-104 - C2 -3TIF 3.3 Y796_METJA
64 PsiBlast_CBE 81.7936%-103 - C2 -4YMU 4.6 ?
62 PsiBlast_CBE 80.7336% -97 - C2 -4YMV 4.7 ?
98 PsiBlast_CBE 76.1431%-107 - C2 -4P33 2.6 LPTB_ECOLI
97 PsiBlast_CBE 75.2531%-105 - C2 -4P33 2.6 LPTB_ECOLI
101 PsiBlast_CBE 72.1231% -85 - C2 -4AYX 4.3 ABCBA_HUMAN
104 PsiBlast_CBE 70.7632% -92 - C2 -4AYW 4.4 ABCBA_HUMAN
102 PsiBlast_CBE 70.2431% -81 - C2 -4AYT 4.7 ABCBA_HUMAN