@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA2251: (2016-04-02 )
MIKVTDVEKSYQSAHVFKRRRTPIVKGVSFECPIGATIAIIGESGSGKSTLSRMILGIEKPDKGCVTLNDLPMHKKKVRRHQIGAVFQDYTSSLHPFQTVREILFEVMCQCDGQPKEVMEVQAITLLEEVGLSKAYMDKYPNMLSGGEAQRVAIARAICINPKYILFDEAISSLDMSIQTQILDLLIHLRETRQLSYIFITHDIQAATYLCDQLIIFKNGKIEEQIPTSALHKSDNAYTRELIEKQLSF

Atome Classification :

(40 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_J_5(4YMU)
?
[Raw transfer]




ATP_B_6(3FVQ)
FBPC_NEIG1
[Raw transfer]




ATP_A_7(4YMU)
?
[Raw transfer]




ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]




ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]




ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]




AGS_B_6(3C4J)
?
[Raw transfer]




ANP_J_5(3C41)
?
[Raw transfer]




ATP_J_5(4YMV)
?
[Raw transfer]




ATP_A_6(4YMV)
?
[Raw transfer]




ANP_K_6(3C41)
?
[Raw transfer]




AGS_A_4(3C4J)
?
[Raw transfer]




ADP_A_5(2Q0H)
?
[Raw transfer]




ATP_B_3(4FWI)
?
[Raw transfer]




ADP_B_6(2Q0H)
?
[Raw transfer]




ADP_A_5(2OLJ)
?
[Raw transfer]




ADP_A_2(4U00)
?
[Raw transfer]




ADP_B_6(2OLJ)
?
[Raw transfer]




AT4_D_8(2OLK)
?
[Raw transfer]




AT4_B_6(2OLK)
?
[Raw transfer]




AT4_C_7(2OLK)
?
[Raw transfer]




AT4_A_5(2OLK)
?
[Raw transfer]




ATP_C_3(1VCI)
?
[Raw transfer]




LMT_B_4(4MKI)
ECFA2_CALS4
[Raw transfer]




LMT_A_7(4MKI)
ECFA2_CALS4
[Raw transfer]




87 Fugue 92.6634%-115 - C1 -3TUZ - METN_ECOLI -
21 PsiBlast_CBE 90.9735%-125 - C1 -4YMV 5.2 ?
22 PsiBlast_CBE 89.5135%-129 - C1 -4YMU 5.9 ?
80 HHSearch 88.8433%-122 - C1 -1B0U - HISP_SALTY -
4 PsiBlast_PDB 88.7835%-126 - C1 -4YMV 5.6 ?
73 HHSearch 86.9635%-127 - C1 -3TUI - METN_ECOLI -
24 PsiBlast_CBE 86.7333%-122 - C1 -4U02 - ? -
2 PsiBlast_PDB 86.5535%-126 - C1 -4YMT - ? -
1 PsiBlast_PDB 86.3635%-129 - C1 -4YMS - ? -
5 PsiBlast_PDB 86.1535%-127 - C1 -4YMW - ? -
3 PsiBlast_PDB 85.9635%-127 - C1 -4YMU 5.9 ?
7 PsiBlast_PDB 85.5933%-119 - C1 -4U02 - ? -
29 PsiBlast_CBE 85.3834%-117 - C1 -3TUI - METN_ECOLI -
30 PsiBlast_CBE 84.7434%-115 - C1 -3TUI - METN_ECOLI -
10 PsiBlast_PDB 84.6434%-119 - C1 -3TUZ - METN_ECOLI -
25 PsiBlast_CBE 84.2633%-118 - C1 -4U02 - ? -
6 PsiBlast_PDB 83.9233%-120 - C1 -4U00 6.1 ?
9 PsiBlast_PDB 83.5334%-118 - C1 -3TUI - METN_ECOLI -
26 PsiBlast_CBE 83.5034%-115 - C1 -3TUZ - METN_ECOLI -
23 PsiBlast_CBE 83.4233%-118 - C1 -4U02 - ? -
53 PsiBlast_CBE 79.7733%-126 - C1 -1B0U 5.9 HISP_SALTY
39 PsiBlast_CBE 76.8832%-116 - C1 -2OLK 6.3 ?
41 PsiBlast_CBE 76.0132%-114 - C1 -2OLK 6.3 ?
14 PsiBlast_PDB 75.9932%-120 - C1 -2OLJ 5.8 ?
13 PsiBlast_PDB 74.9232%-111 - C1 -3C41 6.7 ?
18 PsiBlast_PDB 73.9132%-118 - C1 -3C4J 6.8 ?
15 PsiBlast_PDB 73.6932%-115 - C1 -2OLK 6.1 ?
17 PsiBlast_PDB 73.6032%-116 - C1 -2Q0H 5.7 ?
35 PsiBlast_CBE 73.3232%-112 - C1 -2Q0H 6.0 ?
40 PsiBlast_CBE 73.0832%-117 - C1 -2OLK 6.2 ?
34 PsiBlast_CBE 72.3832%-119 - C1 -3C4J 5.4 ?
33 PsiBlast_CBE 72.2932%-115 - C1 -3C41 6.0 ?
59 PsiBlast_CBE 71.7632%-121 - C1 -4FWI 3.9 ?
42 PsiBlast_CBE 71.7632%-115 - C1 -2OLJ 5.8 ?
45 PsiBlast_CBE 69.8531%-119 - C1 -4MKI 2.1 ECFA2_CALS4
71 HHSearch 69.3630%-119 - C1 -3FVQ 6.9 FBPC_NEIG1
44 PsiBlast_CBE 69.3231%-122 - C1 -4MKI 4.0 ECFA2_CALS4
55 PsiBlast_CBE 63.9832%-125 - C1 -3FVQ 7.2 FBPC_NEIG1
56 PsiBlast_CBE 62.6432%-123 - C1 -3FVQ 6.9 FBPC_NEIG1
54 PsiBlast_CBE 36.7131%-125 - C1 -1VCI 3.9 ?