@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA2266: (2016-04-02 )
MTVLTDKIAVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKDKLQNVANQLAQDSVKVVPTDVTNKEEVDELMKIAQQTFGGLDIVINSAGQMLSSKITDYQVDEWDSMIDVNIKGTLYTAQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSISPGMVDTAITAAYNPSDRKKLDPQDIAEAVLYALTQPKHVNVNEITVRPV

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAP_C_7(3P19)
?
[Raw transfer]



NDP_B_7(2JAP)
?
[Raw transfer]



NDP_A_5(2JAP)
?
[Raw transfer]



NDP_D_11(2JAP)
?
[Raw transfer]



NAP_B_6(3P19)
?
[Raw transfer]



NDP_C_9(2JAP)
?
[Raw transfer]



NDP_A_5(2JAH)
?
[Raw transfer]



NAP_A_5(3P19)
?
[Raw transfer]



NAP_D_8(3P19)
?
[Raw transfer]



EDO_B_22(3RRO)
FABG_VIBCH
[Raw transfer]



EDO_A_10(3RRO)
FABG_VIBCH
[Raw transfer]



ACY_A_9(1XG5)
DHR11_HUMAN
[Raw transfer]



ACY_A_9(1XG5)
DHR11_HUMAN
[Raw transfer]



ACY_C_10(1XG5)
DHR11_HUMAN
[Raw transfer]



ACY_D_11(1XG5)
DHR11_HUMAN
[Raw transfer]
36 PsiBlast_CBE 88.6933% -96 - C1 -1XG5 3.7 DHR11_HUMAN
8 PsiBlast_PDB 87.0833% -96 - C1 -1XG5 3.7 DHR11_HUMAN
3 PsiBlast_PDB 86.5338% -90 - C1 -2JAP 9.1 ?
124 HHSearch 86.3635% -84 - C1 -1XG5 3.7 DHR11_HUMAN
30 PsiBlast_CBE 86.1038% -89 - C1 -2JAP 8.6 ?
35 PsiBlast_CBE 86.0133% -94 - C1 -1XG5 3.7 DHR11_HUMAN
28 PsiBlast_CBE 85.8738% -89 - C1 -2JAP 8.7 ?
6 PsiBlast_PDB 85.6638% -90 - C1 -2JAH 12.5 ?
37 PsiBlast_CBE 85.1433%-100 - C1 -1XG5 - DHR11_HUMAN -
29 PsiBlast_CBE 85.0638% -89 - C1 -2JAP 9.0 ?
23 PsiBlast_CBE 83.7534% -93 - C1 -3ASV - ? -
25 PsiBlast_CBE 81.0634% -90 - C1 -3ASV - ? -
112 HHSearch 80.5032% -87 - C1 -2BGK - SILD_PODPE -
2 PsiBlast_PDB 80.3934% -89 - C1 -3ASV - ? -
32 PsiBlast_CBE 80.3735% -87 - C1 -3P19 12.8 ?
26 PsiBlast_CBE 80.3234% -90 - C1 -3ASV - ? -
19 PsiBlast_PDB 80.2633% -86 - C1 -1VL8 - ? -
59 PsiBlast_CBE 80.0333% -85 - C1 -1VL8 - ? -
33 PsiBlast_CBE 79.6035% -88 - C1 -3P19 9.5 ?
24 PsiBlast_CBE 79.4634% -87 - C1 -3ASV - ? -
31 PsiBlast_CBE 78.5035% -85 - C1 -3P19 9.5 ?
4 PsiBlast_PDB 77.0335% -85 - C1 -3P19 9.8 ?
48 PsiBlast_CBE 71.2132% -86 - C1 -3RRO 2.5 FABG_VIBCH
13 PsiBlast_PDB 70.6632% -83 - C1 -3RRO 2.5 FABG_VIBCH