@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA2337: (2016-04-03 )
MENYCILGNPNVGKTSLFNALTGSYEYIGNWSGVTVEKKVGKLKENVGQLIDLPGTYDLSPISKDETVVTDYLLNDSFSGIINIVDASQLKRNVQLTVQLLELNQPIYIGLNMIDVATKRGIKIDYHKLMKKLKTPIFPVVARTGKGTKYLLGEIKHLGEGYQPHFKINYGEKIEETIKNMCQIIMTETSHDKYQARFIAIQFLLNNMQIANELNSEVVNKLSSLRDQVAEQVGAVSVRREMERIRNHYIETLLQDVVTYPDEDKQYFSSRIDKILTHKYIGMPIFLAIMWLIFQTTFTWIGTPLSDQLDAFIGGTFTDSVKTIMNYLGVIPFLQDLITDGIIAGVGSVLVFVPQIVVLFFFISLLEDSGYMARIAVLMDRIMESFGLSGKSFIPMIIGFGCNVPSIMAARSIENEKERLTTILIAPFMSCSARLPVYALFVGIFFKENQSLVVLSLYVLGIIMAFLVSTVLTKTILKNDNAIFIVELPTYRVPSIKTLWRSTWEKAKGFVRKAGTFIFGGSVVIWLLSYVGPHGINVNINQSFLHMVGSFFGMLVQPLGFGTWQAGATLVPGFLAKEVIVSSMAIIYSSGDAGLVNVIQNQFTPLSAYAFMIFILLYIPCVSTVAAIRKETYSWKWTALAVAYPLVTAYVLTFIFYQVGHLFV

Atome Classification :

(48 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GNP_B_7(3A1U)
?
[Raw transfer]



GNP_A_3(3A1U)
?
[Raw transfer]



GGM_A_2(3B1V)
?
[Raw transfer]



GGM_A_2(3B1V)
?
[Raw transfer]



GDP_A_3(3SS8)
?
[Raw transfer]



GNP_A_3(3B1X)
?
[Raw transfer]



GNP_B_5(3B1X)
?
[Raw transfer]



AGO_A_2(3LX5)
?
[Raw transfer]



GDP_B_7(3SS8)
?
[Raw transfer]



GNH_A_2(3B1Y)
?
[Raw transfer]



AGO_A_4(3HYT)
FEOB_ECOLI
[Raw transfer]



GDP_B_4(2WIB)
?
[Raw transfer]



GDP_B_5(3I8X)
FEOB_ECOLI
[Raw transfer]



GNP_A_3(2WJI)
FEOB_METJA
[Raw transfer]



GNP_A_3(2WJI)
FEOB_METJA
[Raw transfer]



GNP_A_2(2WIC)
?
[Raw transfer]



AGO_C_8(3HYT)
FEOB_ECOLI
[Raw transfer]



GNP_B_5(2WJI)
FEOB_METJA
[Raw transfer]



GDP_B_5(2WJG)
FEOB_METJA
[Raw transfer]



BGO_B_6(3TAH)
?
[Raw transfer]



GDP_B_6(3B1W)
?
[Raw transfer]



GDP_A_2(3LX8)
?
[Raw transfer]



BGO_A_3(3TAH)
?
[Raw transfer]



GDP_A_3(4NON)
?
[Raw transfer]



GCP_B_7(3I92)
FEOB_ECOLI
[Raw transfer]



GDP_A_5(3B1W)
?
[Raw transfer]



GNP_B_7(3A1U)
?
[Raw transfer]



AGO_B_6(3HYT)
FEOB_ECOLI
[Raw transfer]



GDP_C_7(3B1W)
?
[Raw transfer]



GDP_A_4(2WJG)
FEOB_METJA
[Raw transfer]



GDP_A_4(2WJG)
FEOB_METJA
[Raw transfer]



GDP_A_3(2WJH)
FEOB_METJA
[Raw transfer]



GDP_A_3(2WJJ)
FEOB_METJA
[Raw transfer]



GDP_D_8(3B1W)
?
[Raw transfer]



GDP_B_4(4NON)
?
[Raw transfer]



GCP_A_5(3I92)
FEOB_ECOLI
[Raw transfer]



GDP_C_6(3I8X)
FEOB_ECOLI
[Raw transfer]



GDP_A_3(3A1S)
?
[Raw transfer]



GDP_A_2(3A1T)
?
[Raw transfer]



GCP_C_9(3I92)
FEOB_ECOLI
[Raw transfer]



GDP_A_3(3W5J)
?
[Raw transfer]



GDP_A_3(3W5J)
?
[Raw transfer]



FLC_B_6(2WJH)
FEOB_METJA
[Raw transfer]



GNH_A_3(4R98)
FEOB_ECOLI
[Raw transfer]



GDP_B_4(2WIB)
?
[Raw transfer]
1 PsiBlast_PDB 94.7432% -89 - C9 -3K53 - ? -
25 PsiBlast_CBE 92.8338% -85 - C9 -3B1W 6.5 ?
81 Fugue 91.9832% -89 - C9 -3I8S - FEOB_ECOLI -
24 PsiBlast_CBE 89.6938% -86 - C9 -3B1W 6.6 ?
10 PsiBlast_PDB 89.1138% -86 - C9 -3B1W 6.8 ?
7 PsiBlast_PDB 88.5638% -81 - C9 -4NON 6.9 ?
58 HHSearch 88.3932% -75 - C9 -3I8S - FEOB_ECOLI -
2 PsiBlast_PDB 88.3238% -78 - C9 -3LX5 10.4 ?
26 PsiBlast_CBE 88.0238% -84 - C9 -3B1W 6.9 ?
11 PsiBlast_PDB 87.9538% -85 - C9 -3TAH 6.4 ?
27 PsiBlast_CBE 87.7538% -86 - C9 -3TAH 6.8 ?
3 PsiBlast_PDB 87.5238% -84 - C9 -3LX8 7.3 ?
61 HHSearch 87.1433% -68 - C9 -3B1V 11.3 ?
23 PsiBlast_CBE 86.8938% -88 - C9 -4NON 6.6 ?
8 PsiBlast_PDB 86.7338% -88 - C9 -3B1Y 7.8 ?
45 PsiBlast_CBE 86.4435% -79 - C9 -3A1V - ? -
60 HHSearch 86.3730% -63 - C9 -3A1S 6.5 ?
47 PsiBlast_CBE 86.1435% -76 - C9 -3A1U Error ?
6 PsiBlast_PDB 86.1038% -77 - C9 -3B1X 10.0 ?
21 PsiBlast_CBE 85.9138% -76 - C9 -3SS8 7.8 ?
46 PsiBlast_CBE 85.6735% -82 - C9 -3A1U 7.3 ?
22 PsiBlast_CBE 85.6638% -75 - C9 -3B1X 10.0 ?
4 PsiBlast_PDB 85.5538% -78 - C9 -3SS8 8.2 ?
48 PsiBlast_CBE 85.2635% -80 - C9 -3A1T 6.1 ?
9 PsiBlast_PDB 85.0138% -78 - C9 -3B1V 11.3 ?
63 HHSearch 82.6543% -78 * C9 *2WJG 5.8 FEOB_METJA
30 PsiBlast_CBE 81.5145% -82 - C9 -2WJG 5.7 FEOB_METJA
14 PsiBlast_PDB 81.4345% -84 - C9 -2WJG 5.8 FEOB_METJA
19 PsiBlast_PDB 80.9847% -86 - C9 -3I92 6.2 FEOB_ECOLI
64 HHSearch 80.5844% -81 - C9 -2WJI 7.2 FEOB_METJA
35 PsiBlast_CBE 80.5647% -84 - C9 -3I8X 7.0 FEOB_ECOLI
33 PsiBlast_CBE 80.3947% -81 - C9 -3I92 7.0 FEOB_ECOLI
41 PsiBlast_CBE 80.2646% -84 - C9 -2WIB 3.2 ?
17 PsiBlast_PDB 79.7845% -78 - C9 -2WJJ 6.3 FEOB_METJA
34 PsiBlast_CBE 79.6947% -86 - C9 -3I8X 6.0 FEOB_ECOLI
13 PsiBlast_PDB 79.5345% -80 - C9 -2WJH 5.3 FEOB_METJA
32 PsiBlast_CBE 79.3047% -77 - C9 -3I92 5.6 FEOB_ECOLI
38 PsiBlast_CBE 79.2747% -88 - C9 -4R98 6.0 FEOB_ECOLI
29 PsiBlast_CBE 78.9245% -73 - C9 -2WJH 3.5 FEOB_METJA
40 PsiBlast_CBE 78.1946% -88 - C9 -2WIB 6.4 ?
12 PsiBlast_PDB 77.3045% -82 - C9 -2WJI 7.2 FEOB_METJA
28 PsiBlast_CBE 77.2245% -85 - C9 -2WJI 7.5 FEOB_METJA
39 PsiBlast_CBE 76.6046% -88 - C9 -2WIC 8.0 ?
20 PsiBlast_PDB 76.2647% -85 - C9 -3HYT 7.3 FEOB_ECOLI
65 HHSearch 72.9237% -72 - C9 -3W5J 5.8 ?
37 PsiBlast_CBE 72.8847% -86 - C9 -3HYT 4.9 FEOB_ECOLI
36 PsiBlast_CBE 72.8147% -80 - C9 -3HYT 6.6 FEOB_ECOLI
51 PsiBlast_CBE 71.8640% -80 - C9 -3W5J 5.8 ?