@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA2344: (2016-04-03 )
MANTKKTTLDITGMTCAACSNRIEKKLNKLDDVNAQVNLTTEKATVEYNPDQHDVQEFINTIQHLGYGVTVETVELDITGMTCAACSSRIEKVLNKMNGVQNATVNLTTEQAKVDYYPEETDADKLVTRIQKLGYDASIKDNNKDQTSRKAEALQHKLIKLIISAVLSLPLLMLMFVHLFNMHIPALFTNPWFQFILATPVQFIIGWQFYVGAYKNLRNGGANMDVLVAVGTSAAYFYSIYEMVRWLNGSTTQPHLYFETSAVLLTLILFGKYLEARAKSQTTNALGELLSLQAKEARILKDGNEVMIPLNEVHVGDTLIVKPGEKIPVDGKIIKGMTAIDESMLTGESIPVEKNVDDTVIGSTMNKNGTITMTATKVGGDTALANIIKVVEEAQSSKAPIQRLADIISGYFVPIVVGIALLIFIVWITLVTPGTFEPALVASISVLVIACPCALGLATPTSIMVGTGRAAENGILFKGGEFVERTHQIDTIVLDKTGTITNGRPVVTDYHGDNQTLQLLATAEKDSEHPLAEAIVNYAKEKQLTLTETTTFKAVPGHGIEATIDHHHILVGNRKLMADNDISLPKHISDDLTHYERDGKTAMLIAVNYSLTGIIAVADTVKDHAKDAIKQLHDMGIEVAMLTGDNKNTAQAIAKQVGIDTVIADILPEEKAAQIAKLQQQGKKVAMVGDGVNDAPALVKADIGIAIGTGTEVAIEAADITILGGDLMLIPKAIYASKATIRNIRQNLFWAFGYNIAGIPIAALGLLAPWVAGAAMALSSVSVVTNALRLKKMRLEPRRKDA

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_B_4(2YJ5)
?
[Raw transfer]



ACP_B_5(3A1C)
?
[Raw transfer]



ACP_A_3(3A1C)
?
[Raw transfer]



ADP_A_3(3A1D)
?
[Raw transfer]



ACP_A_3(3A1C)
?
[Raw transfer]



ACP_A_3(3A1E)
COPA_ARCFU
[Raw transfer]



ADP_B_5(3A1D)
?
[Raw transfer]



ACP_B_5(3A1E)

[Raw transfer]



A99_B_4(2YJ6)
?
[Raw transfer]



A99_A_3(2YJ6)
?
[Raw transfer]



MGF_A_3(4BEV)
?
[Raw transfer]
41 HHSearch 88.4543% -91 - C1 -3J09 - COPA_ARCFU -
1 PsiBlast_PDB 87.9442% -93 - C1 -3J09 - COPA_ARCFU -
61 Fugue 86.8246% -99 - C1 -3RFU - ? -
23 PsiBlast_CBE 85.3445%-100 - C1 -3RFU - ? -
21 PsiBlast_CBE 85.3045%-100 - C1 -3RFU - ? -
22 PsiBlast_CBE 85.1945%-100 - C1 -3RFU - ? -
2 PsiBlast_PDB 85.1845%-100 - C1 -3RFU - ? -
4 PsiBlast_PDB 85.0345%-100 - C1 -4BYG - ? -
3 PsiBlast_PDB 84.9845%-100 - C1 -4BEV 2.4 ?
5 PsiBlast_PDB 78.7644% -92 - C1 -3J08 - COPA_ARCFU -
42 HHSearch 78.7244% -92 - C1 -3J08 - COPA_ARCFU -
7 PsiBlast_PDB 76.8132% -94 - C1 -4UMW - ? -
62 Fugue 72.1933% -75 - C1 -4UMW - ? -
6 PsiBlast_PDB 71.4532% -87 - C1 -4UMV - ? -
66 Fugue 65.6823% -67 - C1 -3B8E - AT1A1_PIG -
43 HHSearch 64.3925% -74 - C1 -2ZXE - ? -
25 PsiBlast_CBE 57.2543% -84 - C1 -3A1C 7.2 ?
24 PsiBlast_CBE 56.8743% -83 - C1 -3A1D 5.3 ?
9 PsiBlast_PDB 56.3243% -83 - C1 -3A1D 5.8 ?
48 HHSearch 56.2944% -81 - C1 -3A1C 6.0 ?
26 PsiBlast_CBE 56.0242% -84 - C1 -3A1E 6.5
8 PsiBlast_PDB 55.9843% -81 - C1 -3A1C 5.9 ?
10 PsiBlast_PDB 55.9442% -81 - C1 -3A1E 5.7 COPA_ARCFU
28 PsiBlast_CBE 43.5933% -62 - C1 -2YJ6 6.3 ?
18 PsiBlast_PDB 42.9033% -62 - C1 -2YJ6 6.2 ?
29 PsiBlast_CBE 42.6033% -61 - C1 -2YJ5 5.9 ?