@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA2469: (2016-04-04 )
MIYIDKNESPVTPLDEKTMTSIISATPYNLYPDAAYEQFKEAYAKFYGLSPEQIIAGNGSDELIQKLMLIMPEGPALTLNPDFFMYQAYAAQVNREIAFVDAGSDLTFDLETILTKIDEVQPSFFIMSNPHNPSGKQFDTAFLTAIADKMKALNGYFVIDEAYLDYGTAYDVELAPHILRMRTLSKAFGIAGLRLGVLISTAGTIKHIQKIEHPYPLNVFTLNIATYIFRHREETRVFLTMQRQLAEQLKQIFDTHVADKMSVFPSNANFVLTKGSAAHQLGQYVYEQGFKPRFYDEPVMKGYVRYSIATASQLKQLEEIVKEWSAKYDLSKTTKHS

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PMP_A_2(1FG7)
HIS8_ECOLI
[Raw transfer]



PMP_A_11(3CQ5)
HIS8_CORGL
[Raw transfer]



33P_C_3(1LC8)
COBD_SALTY
[Raw transfer]



PLP_C_3(1GEX)
HIS8_ECOLI
[Raw transfer]



PLP_A_3(1IJI)
HIS8_ECOLI
[Raw transfer]



PPE_C_3(1GEY)
HIS8_ECOLI
[Raw transfer]



MES_A_4(4R8D)
?
[Raw transfer]



HSA_E_5(1GEX)
HIS8_ECOLI
[Raw transfer]



144_A_10(3CQ5)
HIS8_CORGL
[Raw transfer]
34 HHSearch 91.5625%-107 - C1 -3EUC - HIS82_CUPPJ -
33 HHSearch 91.5325%-102 - C1 -1FG7 - HIS8_ECOLI -
39 HHSearch 89.7423%-101 - C1 -1LC5 - COBD_SALTY -
54 Fugue 89.3124%-100 - C1 -1IJI - HIS8_ECOLI -
41 HHSearch 88.2424%-108 - C1 -3CQ5 - HIS8_CORGL -
2 PsiBlast_PDB 86.5426% -88 - C1 -1GEX 6.3 HIS8_ECOLI
35 HHSearch 86.4623%-108 - C1 -3FFH - HIS8_LISIN -
18 PsiBlast_PDB 85.8825% -88 - C1 -4R2N - ? -
4 PsiBlast_PDB 85.7726% -89 - C1 -1IJI 4.7 HIS8_ECOLI
6 PsiBlast_PDB 85.4825% -89 - C1 -1FG7 5.1 HIS8_ECOLI
1 PsiBlast_PDB 85.2326% -88 - C1 -1GEW - HIS8_ECOLI -
19 PsiBlast_PDB 85.0125% -88 - C1 -4R5Z - ? -
3 PsiBlast_PDB 84.3726% -87 - C1 -1GEY 8.6 HIS8_ECOLI
55 Fugue 84.1323% -92 - C1 -1FG7 - HIS8_ECOLI -
8 PsiBlast_PDB 83.8527%-111 - C1 -3EUC - HIS82_CUPPJ -
5 PsiBlast_PDB 83.5925% -87 - C1 -1FG3 - HIS8_ECOLI -
38 HHSearch 83.2420%-106 - C1 -3FTB - ? -
42 HHSearch 83.0421%-114 - C1 -3P1T - ? -
9 PsiBlast_PDB 82.1325% -94 - C1 -3CQ5 5.1 HIS8_CORGL
10 PsiBlast_PDB 80.8825% -90 - C1 -3CQ6 - HIS8_CORGL -