@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA2492: (2016-04-04 )
MTILSVQHVSKTYGKKHTFQALKDINFDIQKGEFVAIMGPSGSGKTTLLNVLSSIDQISSGSVIANGQELNKLNQKALAKFRKESLGFIFQDYSILPTLTVKENIMLPLSVQKMSKATMEENYKAITTALGIYDLGNKYPSELSGGQQQRTAAARAFVHKPQIIFADEPTGALDSKSANDLLQRLEEMNKSFDTTIVMVTHDPVAASFAERVIMLKDGQIHTQLYQEGRSKQAFYEDIVHLQSVLGGVSNDI

Atome Classification :

(41 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_7(4YMU)
?
[Raw transfer]



ATP_J_5(4YMU)
?
[Raw transfer]



ATP_B_6(3FVQ)
FBPC_NEIG1
[Raw transfer]



ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]



ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]



AGS_B_6(3C4J)
?
[Raw transfer]



ATP_A_6(4YMV)
?
[Raw transfer]



ATP_B_6(1L2T)
Y796_METJA
[Raw transfer]



ANP_K_6(3C41)
?
[Raw transfer]



ATP_J_5(4YMV)
?
[Raw transfer]



AGS_A_4(3C4J)
?
[Raw transfer]



ADP_B_8(3TIF)
Y796_METJA
[Raw transfer]



ADP_A_5(2HYD)
Y1866_STAAM
[Raw transfer]



ANP_J_5(3C41)
?
[Raw transfer]



ADP_A_3(1F3O)
Y796_METJA
[Raw transfer]



ADP_B_6(2HYD)
Y1866_STAAM
[Raw transfer]



ADP_A_5(2Q0H)
?
[Raw transfer]



ADP_B_6(2OLJ)
?
[Raw transfer]



ADP_B_6(2Q0H)
?
[Raw transfer]



ADP_A_2(4U00)
?
[Raw transfer]



ADP_A_5(2OLJ)
?
[Raw transfer]



AT4_C_7(2OLK)
?
[Raw transfer]



AT4_B_6(2OLK)
?
[Raw transfer]



AT4_D_8(2OLK)
?
[Raw transfer]



ATP_C_3(1VCI)
?
[Raw transfer]



AT4_A_5(2OLK)
?
[Raw transfer]
3 PsiBlast_PDB 91.9041%-101 - C1 -1F3O 6.0 Y796_METJA
21 PsiBlast_CBE 90.7441%-106 - C1 -1L2T 6.7 Y796_METJA
1 PsiBlast_PDB 89.8541%-103 - C1 -1L2T - Y796_METJA -
2 PsiBlast_PDB 88.8541%-101 - C1 -3TIF - Y796_METJA -
22 PsiBlast_CBE 88.7341%-106 - C1 -3TIF 6.4 Y796_METJA
116 HHSearch 77.5538% -94 - C1 -2PCJ - LOLD_AQUAE -
19 PsiBlast_PDB 75.8334% -86 - C1 -1OXV - ? -
26 PsiBlast_CBE 75.6435% -94 - C1 -4U02 - ? -
23 PsiBlast_CBE 75.4138% -97 - C1 -2PCJ - LOLD_AQUAE -
6 PsiBlast_PDB 75.2035% -95 - C1 -4U00 6.4 ?
30 PsiBlast_CBE 75.0434% -88 - C1 -1OXV - ? -
18 PsiBlast_PDB 74.9034% -88 - C1 -1OXU - ? -
25 PsiBlast_CBE 74.8235% -98 - C1 -4U02 - ? -
4 PsiBlast_PDB 74.2938% -95 - C1 -2PCJ - LOLD_AQUAE -
24 PsiBlast_CBE 73.9835% -89 - C1 -4U02 - ? -
5 PsiBlast_PDB 73.6938% -96 - C1 -2PCL - LOLD_AQUAE -
109 HHSearch 73.6131%-101 - C1 -3RLF - MALK_ECOLI -
7 PsiBlast_PDB 73.6135% -91 - C1 -4U02 - ? -
32 PsiBlast_CBE 73.0734% -86 - C1 -1OXU - ? -
13 PsiBlast_PDB 72.9435%-101 - C1 -4YMU 5.7 ?
29 PsiBlast_CBE 72.3335% -99 - C1 -4YMU 5.8 ?
84 PsiBlast_CBE 72.0433% -87 - C1 -2HYD 4.2 Y1866_STAAM
87 PsiBlast_CBE 71.6932% -95 - C1 -1B0U 6.0 HISP_SALTY
85 PsiBlast_CBE 71.6634% -89 - C1 -3FVQ 7.6 FBPC_NEIG1
46 PsiBlast_CBE 71.2834%-100 - C1 -2OLK 6.2 ?
86 PsiBlast_CBE 71.2434% -91 - C1 -3FVQ 7.1 FBPC_NEIG1
28 PsiBlast_CBE 71.2435% -98 - C1 -4YMV 6.2 ?
14 PsiBlast_PDB 70.8435% -98 - C1 -4YMV 5.5 ?
83 PsiBlast_CBE 70.6333% -88 - C1 -2HYD 5.7 Y1866_STAAM
48 PsiBlast_CBE 69.6534% -98 - C1 -2OLK 6.1 ?
47 PsiBlast_CBE 69.1634% -95 - C1 -2OLK 6.6 ?
45 PsiBlast_CBE 67.8234% -95 - C1 -2OLK 6.2 ?
50 PsiBlast_CBE 67.6734%-101 - C1 -2OLJ 6.2 ?
37 PsiBlast_CBE 67.4034%-101 - C1 -3C4J 5.5 ?
38 PsiBlast_CBE 65.9234% -94 - C1 -3C4J 6.6 ?
36 PsiBlast_CBE 65.7834% -91 - C1 -3C41 7.1 ?
35 PsiBlast_CBE 65.7234% -94 - C1 -3C41 6.2 ?
40 PsiBlast_CBE 64.8934% -93 - C1 -2Q0H 5.7 ?
34 PsiBlast_CBE 63.2331% -96 - C1 -1VCI 4.4 ?
39 PsiBlast_CBE 62.8534% -95 - C1 -2Q0H 6.0 ?
49 PsiBlast_CBE 62.8134% -87 - C1 -2OLJ 6.0 ?