@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SAP011: (2016-04-04 )
MAKLLIMSVVSFCFIFLLLVFFRYILKRYFNYSLNYKVWYLTMLAGLIPFIPIKFSFIKFNNVNNQAPTVESKSHDLNHNINTTKPIQEFTTDIHKFNWDSIDNICTVIWIVLVIILSFKFLKALLYLKYLKKQSLYLNENEKNKIDTILFNHQYKKNIVIRKAEAIQSPITFWYGKYIILIPSSYFKSVIDKRLKYIILHEYAHAKNRDTLHLIIFNIFSIIMSYNPLVHIVKRKIIHDNEVEADRFVLNNINKNEFKTYAESIMDSVLKTPFSNKNILSHSFNGKKSLLKSRLINIKEADLKKQSKLILIFICIFTFFIMIIQSQFLMGQSLTDYNYKKPLQSDYQILDESKNFGSNSGSFVMYSMKKDKYYIYNEKESRKRYSPDSTYKIYLALFGLDRHIISDKNSRMSWNHKHYLFESWNKEQDLNTAMQNSVNWYFERISNQIPKNYTAAQLKQLNYGNENLGSYKSYWMEDSLKISNLEQVIVFKNMMEQNNHFSKKAKNQLSSSLLIKKNEKYELYGKTGTGIVNGKYNNGWFVGYVITNHDKYYFATHLSDGNPSGKNAELISEKILKGMGVLNDQ

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CAZ_C_9(1XKZ)
BLAR_STAAU
[Raw transfer]



CAZ_A_7(1XKZ)
BLAR_STAAU
[Raw transfer]



CAZ_A_7(1XKZ)
BLAR_STAAU
[Raw transfer]



CAZ_D_10(1XKZ)

[Raw transfer]



CAZ_B_8(1XKZ)
BLAR_STAAU
[Raw transfer]



BOU_A_3(3Q7Z)
?
[Raw transfer]



BOU_B_4(3Q7Z)
?
[Raw transfer]



KOL_A_3(3Q82)
BLAR_STAAU
[Raw transfer]



POP_B_11(1XA1)
BLAR_STAAU
[Raw transfer]



IM2_B_5(3Q81)

[Raw transfer]



GOL_A_5(3Q7V)
?
[Raw transfer]



KOL_B_6(3Q82)

[Raw transfer]



IM2_A_3(3Q81)
BLAR_STAAU
[Raw transfer]



GOL_A_6(2IWB)

[Raw transfer]



GOL_A_6(2IWB)

[Raw transfer]



GOL_A_4(3Q81)
BLAR_STAAU
[Raw transfer]



1S6_A_5(4MLL)
BLO1_ECOLX
[Raw transfer]



TLA_B_7(3IF6)
?
[Raw transfer]
21 PsiBlast_CBE 97.7592% -63 - C1 -1XKZ 3.8
6 PsiBlast_PDB 97.4691% -62 - C1 -3UY6 - BLAR_STAAU -
24 PsiBlast_CBE 97.3792% -64 - C1 -1XA1 2.9 BLAR_STAAU
22 PsiBlast_CBE 96.6892% -67 - C1 -1XKZ 3.9 BLAR_STAAU
5 PsiBlast_PDB 96.5992% -59 - C1 -3Q7V 2.2 ?
23 PsiBlast_CBE 96.5592% -63 - C1 -1XKZ 3.0 BLAR_STAAU
29 HHSearch 96.4493% -65 - C1 -1XKZ 3.5 BLAR_STAAU
1 PsiBlast_PDB 96.2392% -65 - C1 -1XKZ 3.5 BLAR_STAAU
2 PsiBlast_PDB 95.9192% -61 - C1 -3Q7Z 5.9 ?
27 PsiBlast_CBE 95.8692% -61 - C1 -3Q7Z 5.3 ?
25 PsiBlast_CBE 95.8592% -63 - C1 -3Q82 2.8
26 PsiBlast_CBE 95.8392% -64 - C1 -3Q81 4.1
4 PsiBlast_PDB 95.7992% -60 - C1 -3Q82 3.6 BLAR_STAAU
3 PsiBlast_PDB 95.7092% -61 - C1 -3Q81 3.9 BLAR_STAAU
28 PsiBlast_CBE 94.9991% -60 - C1 -3UY6 - -
30 HHSearch 75.8845% -52 - C1 -2IWB 3.3
9 PsiBlast_PDB 74.3246% -60 - C1 -2IWC - MECR_STAAN -
7 PsiBlast_PDB 73.7447% -60 - C1 -2IWB 3.3
8 PsiBlast_PDB 72.7746% -58 - C1 -2IWD - MECR_STAAN -
10 PsiBlast_PDB 72.2437% -56 - C1 -1NRF - BLAR_BACLI -
16 PsiBlast_PDB 66.7030% -39 - C1 -4MLL 6.1 BLO1_ECOLX