@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SAP022: (2016-04-04 )
MIKLENVFVKKGNKNILDGCNFNFEKGKSYALVGESGAGKSTLLNIIAGFEDVSQGSIYIEDKLLKKKVDFYRYTLGYLFQNFALLENQTISQNLDLALKFKKNKKDNMNLKKEVLKKVGLDLDIKRIVSSLSGGEQQRVALARLILKDPKIILADEPTGSLDTKNGKIVIDLLLKLLDENKTMIVVTHDLELAKRFDVIVNISELRS

Atome Classification :

(31 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_J_5(4YMU)
?
[Raw transfer]




ATP_A_7(4YMU)
?
[Raw transfer]




ANP_K_6(3C41)
?
[Raw transfer]




ATP_A_6(4YMV)
?
[Raw transfer]




AGS_B_6(3C4J)
?
[Raw transfer]




ATP_B_6(1L2T)
Y796_METJA
[Raw transfer]




ATP_J_5(4YMV)
?
[Raw transfer]




ADP_A_3(1F3O)
Y796_METJA
[Raw transfer]




ADP_A_3(3TIF)
Y796_METJA
[Raw transfer]




ADP_B_8(3TIF)
Y796_METJA
[Raw transfer]




AGS_A_4(3C4J)
?
[Raw transfer]




ADP_B_6(2Q0H)
?
[Raw transfer]




ADP_A_5(2OLJ)
?
[Raw transfer]




ADP_A_5(2Q0H)
?
[Raw transfer]




ADP_A_2(4U00)
?
[Raw transfer]




AT4_D_8(2OLK)
?
[Raw transfer]




AT4_B_6(2OLK)
?
[Raw transfer]




AT4_C_7(2OLK)
?
[Raw transfer]




AT4_A_5(2OLK)
?
[Raw transfer]




EDO_A_12(2PCL)
LOLD_AQUAE
[Raw transfer]




137 HHSearch 86.8934%-112 - C1 -2OLJ - ? -
39 PsiBlast_CBE 82.1738%-122 - C1 -4YMU 5.0 ?
16 PsiBlast_PDB 81.3038%-120 - C1 -4YMU 5.2 ?
117 Fugue 80.2833%-103 - C1 -1Z47 - ? -
28 PsiBlast_CBE 80.1537%-100 - C1 -3C41 5.1 ?
15 PsiBlast_PDB 80.0338%-120 - C1 -4YMT - ? -
18 PsiBlast_PDB 79.7838%-121 - C1 -4YMW - ? -
27 PsiBlast_CBE 79.5238% -99 - C1 -2IT1 - ? -
38 PsiBlast_CBE 79.4838%-121 - C1 -4YMV 5.6 ?
7 PsiBlast_PDB 79.4338% -95 - C1 -2IT1 - ? -
21 PsiBlast_CBE 79.3438% -98 - C1 -1L2T 5.4 Y796_METJA
116 Fugue 79.2732%-116 - C1 -3TUZ - METN_ECOLI -
26 PsiBlast_CBE 78.7737%-103 - C1 -3TIF 5.2 Y796_METJA
14 PsiBlast_PDB 78.3038%-120 - C1 -4YMS - ? -
34 PsiBlast_CBE 78.2637%-102 - C1 -2OLK 4.3 ?
126 HHSearch 78.1731%-118 - C1 -3RLF - MALK_ECOLI -
53 PsiBlast_CBE 77.8832%-122 - C1 -3TUI - METN_ECOLI -
17 PsiBlast_PDB 77.8438%-120 - C1 -4YMV 5.5 ?
1 PsiBlast_PDB 77.8038% -95 - C1 -1L2T - Y796_METJA -
36 PsiBlast_CBE 77.6837%-101 - C1 -2OLK 4.4 ?
29 PsiBlast_CBE 77.4337%-102 - C1 -3C4J 4.0 ?
6 PsiBlast_PDB 76.6538%-107 - C1 -1F3O 4.6 Y796_METJA
9 PsiBlast_PDB 76.5237%-100 - C1 -2OLJ 5.0 ?
12 PsiBlast_PDB 76.1537%-102 - C1 -2Q0H 4.4 ?
13 PsiBlast_PDB 75.4137% -99 - C1 -3C4J 5.4 ?
10 PsiBlast_PDB 75.3837% -95 - C1 -2OLK 4.9 ?
5 PsiBlast_PDB 75.1837% -96 - C1 -3TIF 4.9 Y796_METJA
35 PsiBlast_CBE 74.3037% -94 - C1 -2OLK 5.0 ?
30 PsiBlast_CBE 69.4137% -97 - C1 -2Q0H 5.1 ?
20 PsiBlast_PDB 69.3837%-106 - C1 -2PCL 2.7 LOLD_AQUAE
2 PsiBlast_PDB 68.3632%-106 - C1 -4U00 5.8 ?