@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_0003: (2015-12-11 )
MKTSNTKTPKPVLIAGPCVIESLENLRSIAIKLQPLANNERLDFYFKASFDKANRTSLESYRGPGLEKGLEMLQTIKDEFGYKILTDVHESYQASVAAKVADILQIPAFLCRQTDLIVEVSQTNAIVNIKKGQFMNPKDMQYSVLKALKTRDSSIQSPTYETALKNGVWLCERGSSFGYGNLVVDMRSLKIMREFAPVIFDATHSVQMPGGANGKSSGDSSFPPILPRAAAAVGIDGLFAETHIDPKNALSDGANMLKPDELEHLVTDMLKIQNLF

Atome Classification :

(58 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

H4P_A_5(1PCW)
KDSA_AQUAE
[Raw transfer]




PAI_B_6(1JCX)
KDSA_AQUAE
[Raw transfer]




KD0_B_9(3E12)
KDSA_AQUAE
[Raw transfer]




H4P_B_6(1PCW)
KDSA_AQUAE
[Raw transfer]




1NT_I_9(2NXG)
KDSA_AQUAE
[Raw transfer]




2PG_B_8(1PE1)
KDSA_AQUAE
[Raw transfer]




A5P_K_11(1FXQ)
KDSA_AQUAE
[Raw transfer]




RP5_B_7(2NX1)
KDSA_AQUAE
[Raw transfer]




2PG_B_8(1ZJI)
KDSA_AQUAE
[Raw transfer]




A5P_I_9(1FXQ)
KDSA_AQUAE
[Raw transfer]




PEP_A_7(2A21)
KDSA_AQUAE
[Raw transfer]




A5P_I_9(1FXQ)
KDSA_AQUAE
[Raw transfer]




PEP_A_7(1FWS)
KDSA_AQUAE
[Raw transfer]




2PG_A_7(1PE1)
KDSA_AQUAE
[Raw transfer]




A5P_K_11(2EF9)
KDSA_AQUAE
[Raw transfer]




PEP_A_9(2NWR)
KDSA_AQUAE
[Raw transfer]




PEP_A_6(1FWW)
KDSA_AQUAE
[Raw transfer]




PEP_B_7(1FWT)
KDSA_AQUAE
[Raw transfer]




PEP_A_9(2NWR)
KDSA_AQUAE
[Raw transfer]




PEZ_A_7(1PCK)
KDSA_AQUAE
[Raw transfer]




PEP_B_8(1FWS)
KDSA_AQUAE
[Raw transfer]




PEP_I_9(1FWN)
KDSA_AQUAE
[Raw transfer]




R5P_A_3(1JCY)
KDSA_AQUAE
[Raw transfer]




R5P_A_3(1ZHA)
KDSA_AQUAE
[Raw transfer]




A5P_B_11(2NWS)
KDSA_AQUAE
[Raw transfer]




A5P_A_7(2A2I)
KDSA_AQUAE
[Raw transfer]




PEP_B_8(3E0I)
KDSA_AQUAE
[Raw transfer]




RP5_A_5(2NX1)
KDSA_AQUAE
[Raw transfer]




PEZ_B_8(1PCK)
KDSA_AQUAE
[Raw transfer]




PEP_A_7(1T96)
KDSA_AQUAE
[Raw transfer]




A5P_D_20(3UND)
?
[Raw transfer]




PEP_B_8(1LRO)
KDSA_AQUAE
[Raw transfer]




A5P_C_15(3UND)
?
[Raw transfer]




A5P_A_8(1T8X)
KDSA_AQUAE
[Raw transfer]




PEP_A_7(3E0I)
KDSA_AQUAE
[Raw transfer]




PEP_B_11(2NWR)
KDSA_AQUAE
[Raw transfer]




PEP_B_8(2A21)
KDSA_AQUAE
[Raw transfer]




A5P_G_7(2NXG)
KDSA_AQUAE
[Raw transfer]




PEP_B_7(1FWW)
KDSA_AQUAE
[Raw transfer]




A5P_A_9(2NWS)
KDSA_AQUAE
[Raw transfer]




PEP_A_7(1LRO)
KDSA_AQUAE
[Raw transfer]




PEP_K_11(1FWN)
KDSA_AQUAE
[Raw transfer]




E4P_A_8(1FWT)
KDSA_AQUAE
[Raw transfer]




PEP_B_8(1ZHA)
KDSA_AQUAE
[Raw transfer]




A5P_A_8(1LRQ)
KDSA_AQUAE
[Raw transfer]




A5P_I_9(2EF9)
KDSA_AQUAE
[Raw transfer]




PEP_B_8(1T96)
KDSA_AQUAE
[Raw transfer]




A5P_B_8(2A2I)
KDSA_AQUAE
[Raw transfer]




A5P_A_8(1FY6)
KDSA_AQUAE
[Raw transfer]




PEP_B_7(1T8X)
KDSA_AQUAE
[Raw transfer]




R5P_A_3(1ZJI)
KDSA_AQUAE
[Raw transfer]




PEP_B_8(1JCY)
KDSA_AQUAE
[Raw transfer]




21 PsiBlast_CBE 95.8249% -95 - C5 -3E12 5.6 KDSA_AQUAE
13 PsiBlast_PDB 95.4249% -92 - C5 -1PCW 5.7 KDSA_AQUAE
6 PsiBlast_PDB 95.3549% -96 - C5 -1FXP - KDSA_AQUAE -
19 PsiBlast_PDB 95.2148% -97 - C5 -1T96 4.3 KDSA_AQUAE
22 PsiBlast_CBE 95.1649% -96 - C5 -3E0I 4.5 KDSA_AQUAE
11 PsiBlast_PDB 95.1249% -93 - C5 -1PE1 4.1 KDSA_AQUAE
5 PsiBlast_PDB 95.0449% -96 - C5 -1FX6 - KDSA_AQUAE -
9 PsiBlast_PDB 95.0049% -93 - C5 -1JCX - KDSA_AQUAE -
2 PsiBlast_PDB 94.9449% -95 - C5 -1FWS 4.4 KDSA_AQUAE
20 PsiBlast_PDB 94.9348% -96 - C5 -1T99 - KDSA_AQUAE -
44 PsiBlast_CBE 94.8748% -96 - C5 -1T8X 3.8 KDSA_AQUAE
1 PsiBlast_PDB 94.8449% -94 - C5 -1FWN 3.9 KDSA_AQUAE
4 PsiBlast_PDB 94.7849% -85 - C5 -1FWW 4.0 KDSA_AQUAE
56 PsiBlast_CBE 94.6848% -94 - C5 -2NWR 4.5 KDSA_AQUAE
28 PsiBlast_CBE 94.6149% -94 - C5 -1JCY 3.9 KDSA_AQUAE
3 PsiBlast_PDB 94.6149% -87 - C5 -1FWT 3.8 KDSA_AQUAE
32 PsiBlast_CBE 94.5849% -94 - C5 -1FXP - KDSA_AQUAE -
33 PsiBlast_CBE 94.5749% -99 - C5 -1FX6 - KDSA_AQUAE -
23 PsiBlast_CBE 94.5749% -94 - C5 -2A2I 2.6 KDSA_AQUAE
39 PsiBlast_CBE 94.5448% -90 - C5 -1ZJI 3.2 KDSA_AQUAE
43 PsiBlast_CBE 94.5048% -95 - C5 -1T96 3.9 KDSA_AQUAE
12 PsiBlast_PDB 94.5049% -94 - C5 -1PCK 4.4 KDSA_AQUAE
26 PsiBlast_CBE 94.4449% -96 - C5 -1PCW 4.9 KDSA_AQUAE
8 PsiBlast_PDB 94.4349% -92 - C5 -1FY6 2.9 KDSA_AQUAE
48 PsiBlast_CBE 94.3548% -92 - C5 -1LRO 3.4 KDSA_AQUAE
29 PsiBlast_CBE 94.2849% -93 - C5 -1JCX 5.7 KDSA_AQUAE
14 PsiBlast_PDB 94.2849% -85 - C5 -2A21 4.2 KDSA_AQUAE
41 PsiBlast_CBE 94.2648% -95 - C5 -1ZHA 2.5 KDSA_AQUAE
37 PsiBlast_CBE 94.2449% -95 - C5 -1FWN 3.8 KDSA_AQUAE
10 PsiBlast_PDB 94.2249% -86 - C5 -1JCY 3.7 KDSA_AQUAE
18 PsiBlast_PDB 94.2048% -92 - C5 -1T8X 3.1 KDSA_AQUAE
35 PsiBlast_CBE 94.1749% -95 - C5 -1FWT 4.1 KDSA_AQUAE
27 PsiBlast_CBE 94.1549% -94 - C5 -1PCK 4.3 KDSA_AQUAE
40 PsiBlast_CBE 94.1448% -94 - C5 -1ZHA 4.1 KDSA_AQUAE
38 PsiBlast_CBE 94.1248% -94 - C5 -1ZJI 3.8 KDSA_AQUAE
7 PsiBlast_PDB 94.0849% -86 - C5 -1FXQ 3.6 KDSA_AQUAE
24 PsiBlast_CBE 93.9949% -94 - C5 -2A21 4.0 KDSA_AQUAE
47 PsiBlast_CBE 93.9748% -95 - C5 -1LRO 3.7 KDSA_AQUAE
36 PsiBlast_CBE 93.8449% -95 - C5 -1FWS 4.2 KDSA_AQUAE
55 PsiBlast_CBE 93.7748% -94 - C5 -2NWR 4.3 KDSA_AQUAE
15 PsiBlast_PDB 93.7549% -85 - C5 -2A2I 3.5 KDSA_AQUAE
104 Fugue 93.5751% -84 - C5 -1FXQ 3.6 KDSA_AQUAE
25 PsiBlast_CBE 93.5649% -94 - C5 -1PE1 4.0 KDSA_AQUAE
34 PsiBlast_CBE 93.5449% -94 - C5 -1FWW 4.2 KDSA_AQUAE
52 PsiBlast_CBE 93.4048% -86 - C5 -2NX1 4.1 KDSA_AQUAE
81 PsiBlast_CBE 93.3648% -94 - C5 -2NXG 6.0 KDSA_AQUAE
54 PsiBlast_CBE 93.3048% -83 - C5 -2NWS 4.4 KDSA_AQUAE
16 PsiBlast_PDB 93.2749% -85 - C5 -3E0I 4.1 KDSA_AQUAE
96 PsiBlast_CBE 92.9748% -85 - C5 -2EF9 3.2 KDSA_AQUAE
82 PsiBlast_CBE 92.9248% -82 - C5 -2NXG 3.7 KDSA_AQUAE
31 PsiBlast_CBE 92.8549% -85 - C5 -1FXQ 4.0 KDSA_AQUAE
51 PsiBlast_CBE 92.4248% -86 - C5 -2NX1 4.4 KDSA_AQUAE
46 PsiBlast_CBE 92.3448% -84 - C5 -1LRQ 3.5 KDSA_AQUAE
112 HHSearch 92.2951% -86 * C5 *2NWR 4.5 KDSA_AQUAE
95 PsiBlast_CBE 92.0648% -83 - C5 -2EF9 3.6 KDSA_AQUAE
53 PsiBlast_CBE 92.0448% -83 - C5 -2NWS 4.2 KDSA_AQUAE
101 PsiBlast_CBE 85.1343% -76 - C5 -3UND 4.6 ?
102 PsiBlast_CBE 85.0743% -76 - C5 -3UND 4.7 ?