@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_0040: (2015-12-12 )
MDSVTLACGNGGKETNALIERVFMPYLKEWIVAFDEDAPKFEASGEYCVSTDSFVITPLIFNGGDIGKLCVCGSANDVSVQGGEPLYLNMGFILEEGLEIPLLKQILQSIQKELFKANLKLLSLDTKVVPKGSVDKLFINTTCIGKIIKPGISSRHLQQGQAIILSDTIANHGASLFATRHEIKLKTNLQSDCQLLYPLLKPLFLSDLKIDALRDATRGGLASVLNEWANSSRVKIVIEEEKIPLKEETKGICEILGLEPYALANEGVFVLALNQKDAPKALEILKSNEKAKNACVIGGVFENPYPSVVLKNAWGFERILEMPEGELLPRIC

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_12(3WJQ)
?
[Raw transfer]




ANP_A_2(3WJP)
?
[Raw transfer]




ATP_A_4(2Z1U)
?
[Raw transfer]




ATP_A_4(2Z1U)
?
[Raw transfer]




ATP_A_4(2Z1U)
?
[Raw transfer]




42 Fugue 96.5438%-114 - C5 -2Z1U 3.5 ?
4 PsiBlast_PDB 96.2740%-113 - C5 -2I6R - HYPE_ECOLI -
5 PsiBlast_PDB 95.7340%-115 - C5 -2RB9 - ? -
3 PsiBlast_PDB 95.7237%-113 - C5 -2Z1U 3.5 ?
23 HHSearch 94.9938%-113 - C5 -2Z1U 3.5 ?
25 HHSearch 93.0839%-110 - C5 -2RB9 - ? -
2 PsiBlast_PDB 90.9137%-111 - C5 -2Z1T - ? -
22 HHSearch 89.2335% -89 - C5 -3WJP - ? -
1 PsiBlast_PDB 88.9143% -96 - C5 -3VTI - ? -
24 HHSearch 88.3944% -99 - C5 -3VTI - ? -
21 PsiBlast_CBE 87.7843% -98 - C5 -3VTI - ? -
8 PsiBlast_PDB 85.7535% -95 - C5 -3VYU - ? -
7 PsiBlast_PDB 84.4935% -97 - C5 -3VYT - ? -
9 PsiBlast_PDB 83.6935% -96 - C5 -3WJR - ? -
11 PsiBlast_PDB 82.9336%-102 - C5 -3WJQ 2.6 ?
10 PsiBlast_PDB 82.6336%-100 - C5 -3WJP 2.6 ?
6 PsiBlast_PDB 82.1835% -91 - C5 -3VYS - ? -
31 HHSearch 63.9018% -85 * C5 *2BTU - PUR5_BACAN -
33 HHSearch 61.9921% -81 - C5 -3C9U - THIL_AQUAE -
36 HHSearch 58.4019% -78 - C5 -2V9Y - PUR2_HUMAN -