@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_0048: (2015-12-12 )
MQKIIEDSLELAKKLQDSISNHLSEQEKAFHFKMQKLLNNPENKVMLIELMDRSFRCLDNKARFEMIEHVLDKYKSREIFSSFEKWLLMGFLSFGKMLPDMSVPFFVNKIRSDTKAMVLDQEESQLRERILKRKNEKIILNVNFIGEEVLGEEEASARFEKYSQALKSNYIQYISIKITTIFSQINILDFEYSKKEIVKRLDALYALALEEEKKQGMPKFINLDMEEFRDLELTVESFMESIAKFDLNAGIVLQAYIPDSYEYLKKLHAFSKERVLKGLKPIKIRFVKGANMESEETIASMKDWALPTFSSKQDTDSNYNKMLDFVLEGDNYKYIHIGAASHNIFEIAYVYTRIHALNDPVVLEHFSFEMLEGMSLQASQELKEMHKLILYAPVCDEAHFNNAIAYLVRRLDENTSSDNFMKAFFNLKVGTSEWKDQEQRFLNSLKGIATLDNTTHRTQDRNAKQTGHTTYPNHSFKNESDTDFILKANREWAKKVRDKMHNAPILELYPEIDGRFEDPNLTPLEVFDRIHHKKIASVHLADKEAILKALEVAKSDKSRFSQKSFTEIHALLSQTAQLFRERRGDLIGISALEVGKTFAETDAEVSEAIDFLEFYPYSLRVLQEQNKKTKFTPKGVGVVIAPWNFPVGISVGTIAAPLAAGNRVIYKPSSLSSVTGYKLCECFWDAGVPRDALIYLPSKGSDISEHLLKDESIKFAILTGGEDTAYKMLKANPTLALSAETGGKNATIVSKMADRDQAIKNVIHSAFSNSGQKCSATSLLVLEKEVYEDENFKKTLIDATLSLSVGDPFDFKNKIGALADKPNEKVIKAIDELKSYENYEIPASFVDDNPYLMKPSIKYGTKKGDFTHQTELFTPILSVMKAKDLDEAIEIVNSTGYGLTSALESLDEREWEYYLERIEAGNIYINKPTTGAIVLRQPFGGVKKSAVGFGRKVGIFNYITQFVNIHQEEEDENALKNPLSEALEGLTQKGYDEHTHELKRAIFMAKSYAYHYKHEFSQAKDYVKIRGEDNLFSYTKVTSVGYRITEKDTLSDMLGVALACLISQIPLTISIENERANKDLTFFLECLKALQANAPIVYESLQKFSEKLNAFNRVRYLKSDLDLLHEQASRLGMVLATAKPCLNGRFELLYYHLERSVSISYHRYGNLGSRVLRQPTCHKSCCAEK

Atome Classification :

(37 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ALA_A_7(2EJD)
?
[Raw transfer]




ALA_B_11(2EIT)
?
[Raw transfer]




SER_B_11(2EHU)
?
[Raw transfer]




ALA_B_8(2EJD)
?
[Raw transfer]




GLU_A_3(2BHQ)
?
[Raw transfer]




PRO_A_3(2J40)
?
[Raw transfer]




GLU_B_4(2BHQ)
?
[Raw transfer]




SER_B_8(2EJL)
?
[Raw transfer]




DPR_A_7(2EJ6)
?
[Raw transfer]




ALA_A_9(2EIT)
?
[Raw transfer]




PRO_B_4(2J40)
?
[Raw transfer]




SER_A_7(2EJL)
?
[Raw transfer]




PRO_B_8(2EIW)
?
[Raw transfer]




DPR_B_8(2EJ6)
?
[Raw transfer]




GLY_B_4(2J5N)
?
[Raw transfer]




FLC_A_3(2IY6)
?
[Raw transfer]




GLY_A_3(2J5N)
?
[Raw transfer]




NAP_B_10(2EHQ)
?
[Raw transfer]




NAP_A_9(2EHQ)
?
[Raw transfer]




NAD_A_3(2BJK)
?
[Raw transfer]




FLC_B_11(2IY6)
?
[Raw transfer]




NAD_B_10(2BJK)
?
[Raw transfer]




NAD_B_12(2EII)
?
[Raw transfer]




NAD_B_13(2J5N)
?
[Raw transfer]




NAD_A_10(2EII)
?
[Raw transfer]




NAD_A_3(2BHP)
?
[Raw transfer]




NAD_A_10(2EHU)
?
[Raw transfer]




1 PsiBlast_PDB 88.7629% -50 - C3 -4NM9 - ? -
2 PsiBlast_PDB 88.0529% -51 - C3 -4NMB - ? -
69 Fugue 86.3426% -46 - C3 -4Q71 - ? -
47 HHSearch 84.2025% -49 - C3 -3HAZ - ? -
49 HHSearch 67.2931% -45 * C3 *1UZB - ? -
50 HHSearch 66.5530% -45 - C3 -3QAN - ROCA1_BACHD -
29 PsiBlast_CBE 64.7034% -48 - C3 -2EHQ 9.1 ?
33 PsiBlast_CBE 64.6033% -47 - C3 -3QAN - ROCA1_BACHD -
22 PsiBlast_CBE 64.6035% -45 - C3 -1UZB - ? -
26 PsiBlast_CBE 64.4934% -47 - C3 -2EIT 2.6 ?
25 PsiBlast_CBE 64.4834% -47 - C3 -2EJ6 2.7 ?
24 PsiBlast_CBE 64.4334% -47 - C3 -2IY6 3.4 ?
7 PsiBlast_PDB 64.4234% -47 - C3 -2IY6 3.4 ?
23 PsiBlast_CBE 64.4134% -48 - C3 -2J5N 8.1 ?
9 PsiBlast_PDB 64.4034% -48 - C3 -2EJ6 2.9 ?
4 PsiBlast_PDB 64.3935% -47 - C3 -2EIW - ? -
32 PsiBlast_CBE 64.3034% -45 - C3 -2BHP - ? -
37 PsiBlast_CBE 64.2834% -47 - C3 -2EJD 2.5 ?
38 PsiBlast_CBE 64.2734% -45 - C3 -2BJA - ? -
18 PsiBlast_PDB 64.2634% -47 - C3 -2EJD 2.6 ?
31 PsiBlast_CBE 64.2434% -45 - C3 -2BHQ 3.7 ?
36 PsiBlast_CBE 64.2234% -47 - C3 -2EJL 2.5 ?
12 PsiBlast_PDB 64.1834% -47 - C3 -2EIT 2.7 ?
28 PsiBlast_CBE 64.1234% -47 - C3 -2EHU 2.6 ?
27 PsiBlast_CBE 64.1234% -47 - C3 -2EII 7.8 ?
21 PsiBlast_CBE 64.1235% -47 - C3 -2EIW 3.4 ?
13 PsiBlast_PDB 64.1134% -48 - C3 -2EHU 8.1 ?
10 PsiBlast_PDB 64.0634% -47 - C3 -2BHQ 3.7 ?
35 PsiBlast_CBE 63.9934% -48 - C3 -2J40 3.3 ?
11 PsiBlast_PDB 63.9734% -46 - C3 -2J5N 2.2 ?
6 PsiBlast_PDB 63.9634% -47 - C3 -2BJK 8.4 ?
19 PsiBlast_PDB 63.8434% -47 - C3 -2EJL 2.4 ?
8 PsiBlast_PDB 63.8434% -48 - C3 -2EHQ 9.0 ?
5 PsiBlast_PDB 63.7834% -46 - C3 -2BHP 7.5 ?
14 PsiBlast_PDB 63.7634% -47 - C3 -2EII 7.7 ?
17 PsiBlast_PDB 63.4334% -47 - C3 -2J40 3.4 ?
30 PsiBlast_CBE 63.2834% -45 - C3 -2BJK 8.0 ?