@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_0066: (2015-12-12 )
MLGLVLLYVGIVLISNGICGLTKVDPKSTAVMNFFVGGLSIVCNVVVITYSALHPTAPVEGAEDIVQVSHHLTSFYGPATGLLFGFTYLYAAINHTFGLDWRPYSWYSLFVAINTVPAAILSHYSDMLDDHKVLGITEGDWWAIIWLAWGVLWLTAFIENILKIPLGKFTPWLAIIEGILTAWIPAWLLFIQHWV

Atome Classification :

(16 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

XP4_B_7(3UX4)
UREI_HELPJ
[Raw transfer]




XP4_C_4(3UX4)
UREI_HELPJ
[Raw transfer]




XP4_C_4(3UX4)
UREI_HELPJ
[Raw transfer]




XP4_C_4(3UX4)
UREI_HELPJ
[Raw transfer]




XP4_C_4(3UX4)
UREI_HELPJ
[Raw transfer]




2 PsiBlast_CBE 93.50100%-153 - C5 -3UX4 5.9 UREI_HELPJ
3 PsiBlast_CBE 93.32100%-153 - C5 -3UX4 Error UREI_HELPJ
14 Fugue 93.24100%-151 - C5 -3UX4 1.9 UREI_HELPJ
4 HHSearch 93.0499%-151 - C5 -3UX4 1.9 UREI_HELPJ
1 PsiBlast_PDB 92.6397%-151 - C5 -3UX4 1.9 UREI_HELPJ
20 Fugue 56.2713%-130 * C4 *2P14 - ? -
18 Fugue 45.5610%-119 - C2 -4FZS - SNX1_HUMAN -
23 Fugue 44.9711%-135 - C4 -4BZW - ? -
13 HHSearch 27.1945% 271 - C1 -3HGL - -
17 Fugue 26.5416% -41 - C3 -2AUA - ? -
10 HHSearch 18.4815% 285 - C5 -1RH5 - SECG_METJA -
9 HHSearch 18.3642% 435 - C5 -1H3L - SIGR_STRCO -
7 HHSearch 17.3547% 59 - C5 -3WU2 - PSBL_THEVL -
5 HHSearch 13.5658% 302 - C5 -3M92 - YCIN_SHIFL -
12 HHSearch 13.5321% 78 * C5 *2KI9 - -
8 HHSearch 11.8113% 127 - C5 -2WW9 - SC6B2_YEAST -