@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_0098: (2015-12-12 )
MRMQTKLIHGGINEDATTGAVSVPIYQTSTYRQDAIGRHKGYEYSRSGNPTRFALEELIADLEGGVKGFAFASGLAGIHAVFSLLQSGDHVLLGDDVYGGNFRLFNKVLVKNGLSCTIIDTSDLSQIKKAIKPNTKALYLETPSNPLLKITDLAQCASVAKEHNLLTIVDNTFATPYCQNPLLLGTDIVAHNGTKYLGGHSDVVAGLVTTNNEALAQEFDFFQNAIGGVLGLQDSWLLQRGIKTLGLRMEAHQKNALCVAEFLEKHPKVERVYYPGLPTHPNHELAKAQMRGFSGMFSFTLKNDSEAVAFVESLKLFILGESLGGVESLVGIPALMTHACIPKAQREAAGIRDGLVRLSVGIEHEQDLLEDLDQAFAKIS

Atome Classification :

(31 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PLG_A_2(4HF8)
?
[Raw transfer]



LCS_A_2(4OMA)
?
[Raw transfer]



PLP_B_8(1E5F)
?
[Raw transfer]



PPJ_A_3(1E5E)
?
[Raw transfer]



PPJ_A_3(1E5E)
?
[Raw transfer]



PPJ_B_7(1E5E)
?
[Raw transfer]



PLP_A_3(1E5F)
?
[Raw transfer]



PZP_A_2(3MKJ)
?
[Raw transfer]



NLE_A_2(3JWB)
?
[Raw transfer]



PLP_C_13(1IBJ)
METC_ARATH
[Raw transfer]



PLP_A_11(1IBJ)
METC_ARATH
[Raw transfer]



PLP_A_11(1IBJ)
METC_ARATH
[Raw transfer]



EDO_A_22(1PFF)
?
[Raw transfer]



MPJ_A_2(3JWA)
?
[Raw transfer]



EDO_A_22(1PFF)
?
[Raw transfer]



ECX_A_2(3JW9)
?
[Raw transfer]
26 PsiBlast_CBE 95.5495%-103 - C1 -4L0O - METB_HELPY -
1 PsiBlast_PDB 95.4195%-104 - C1 -4L0O - METB_HELPY -
22 PsiBlast_CBE 94.0995%-105 - C1 -4L0O - METB_HELPY -
24 PsiBlast_CBE 93.9495%-104 - C1 -4L0O - METB_HELPY -
23 PsiBlast_CBE 92.9895% -99 - C1 -4L0O - METB_HELPY -
25 PsiBlast_CBE 92.9595%-102 - C1 -4L0O - METB_HELPY -
21 PsiBlast_CBE 92.6195%-102 - C1 -4L0O - METB_HELPY -
27 PsiBlast_CBE 91.8295%-102 - C1 -4L0O - METB_HELPY -
29 PsiBlast_CBE 87.8254% -97 - C1 -4IY7 - ? -
28 PsiBlast_CBE 87.4754% -96 - C1 -4IY7 - ? -
30 PsiBlast_CBE 85.7254% -96 - C1 -4IY7 - ? -
4 PsiBlast_PDB 85.6754% -96 - C1 -4IYO - ? -
3 PsiBlast_PDB 85.2254% -96 - C1 -4IY7 - ? -
10 PsiBlast_PDB 81.8742% -95 - C1 -4OMA 5.4 ?
102 HHSearch 81.2749%-100 - C1 -3COG - CGL_HUMAN -
12 PsiBlast_PDB 80.6341% -94 - C1 -3JWA 2.2 ?
13 PsiBlast_PDB 79.9741% -94 - C1 -3JWB 1.9 ?
11 PsiBlast_PDB 79.9242% -95 - C1 -4HF8 5.2 ?
14 PsiBlast_PDB 79.8041% -96 - C1 -3JW9 3.4 ?
15 PsiBlast_PDB 79.6141% -97 - C1 -2RFV - ? -
104 HHSearch 77.8742% -93 - C1 -1IBJ 3.6 METC_ARATH
18 PsiBlast_PDB 76.2741% -97 - C1 -3MKJ 3.9 ?
39 PsiBlast_CBE 76.1043% -92 - C1 -1E5F 2.8 ?
105 HHSearch 75.6644% -91 - C1 -1E5E 5.1 ?
40 PsiBlast_CBE 75.4043% -91 - C1 -1E5F 2.9 ?
20 PsiBlast_PDB 75.4043% -91 - C1 -1E5E 5.1 ?
41 PsiBlast_CBE 75.3943% -91 - C1 -1E5E 3.8 ?
9 PsiBlast_PDB 75.2543% -94 - C1 -1IBJ 3.6 METC_ARATH
35 PsiBlast_CBE 73.2343% -93 - C1 -1IBJ 1.9 METC_ARATH
88 PsiBlast_CBE 72.3945%-101 - C1 -1PFF 2.0 ?
115 HHSearch 69.1643% -94 - C1 -1PFF 2.0 ?