@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_0113: (2015-12-12 )
MSAELIAVYKDEQIIDLESAKVLGLSDGIKALKGTEPIYFDDSPLALEVIRHSCAHLLAQSLKALYPDAKFFVGPVVEEGFYYDFKTTSKISEEDLPKIEAKMKEFAKSKLAITKETLTREQALERFKGDELKHAVMSKISGDIFGVYQQGEFEDLCKGPHLPNTRFLNHFKLTKLAGAYLGGDENNEMLIRIYGIAFATKEGLKDYLFQIEEAKKRDHRKLGVELGLFSFDDEIGAGLPLWLPKGARLRKRIEDLLSQALLLRGYEPVKGPEILKSDVWKISGHYDNYKENMYFTTIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCSFEQIQSEVSAILDFTHKIMQAFGFSYEMELSTRPAKSIGDDKVWEKATNALKEALKEHRIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDMNLPERFKLAFTNEYNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFALKLKEALKKCDIFVEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEVETEILSIRDREKQAQYKMPLKEFLNMVESKMQEVSF

Atome Classification :

(31 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

409_A_4(4HWO)
SYT_ECOLI
[Raw transfer]




TSB_A_3(3UH0)
SYTM_YEAST
[Raw transfer]




TSB_A_3(3UH0)
SYTM_YEAST
[Raw transfer]




SSA_B_6(1FYF)
SYT_ECOLI
[Raw transfer]




SSA_A_5(1FYF)
SYT_ECOLI
[Raw transfer]




409_B_6(4HWO)
SYT_ECOLI
[Raw transfer]




1B2_A_4(4HWR)
SYT_ECOLI
[Raw transfer]




1B3_B_6(4HWS)
SYT_ECOLI
[Raw transfer]




1B2_B_6(4HWR)
SYT_ECOLI
[Raw transfer]




1B3_A_4(4HWS)
SYT_ECOLI
[Raw transfer]




X16_A_4(4HWP)
SYT_ECOLI
[Raw transfer]




X16_B_6(4HWP)
SYT_ECOLI
[Raw transfer]




1B2_B_6(4HWT)
SYTC_HUMAN
[Raw transfer]




AMP_A_4(1QF6)
SYT_ECOLI
[Raw transfer]




1B2_A_4(4HWT)
SYTC_HUMAN
[Raw transfer]




THR_B_5(1EVK)
SYT_ECOLI
[Raw transfer]




2CR_B_9(4P3O)
SYT_ECOLI
[Raw transfer]




2CR_B_8(4P3P)
SYT_ECOLI
[Raw transfer]




2CR_A_4(4P3O)
SYT_ECOLI
[Raw transfer]




2CR_A_4(4P3P)
SYT_ECOLI
[Raw transfer]




53 HHSearch 92.7541% -94 * C1 *1QF6 6.5 SYT_ECOLI
1 PsiBlast_PDB 91.3942% -93 - C1 -1QF6 - SYT_ECOLI -
54 HHSearch 90.2740% -92 - C1 -1NYR - SYT_STAAW -
3 PsiBlast_PDB 89.5242% -95 - C1 -1NYR - SYT_STAAW -
2 PsiBlast_PDB 89.2242% -97 - C1 -1NYQ - SYT_STAAW -
22 PsiBlast_CBE 86.9542% -94 - C1 -1NYQ - SYT_STAAW -
21 PsiBlast_CBE 85.7342% -94 - C1 -1NYR - SYT_STAAW -
24 PsiBlast_CBE 75.1841% -95 - C1 -4HWR 7.5 SYT_ECOLI
40 PsiBlast_CBE 75.0941% -93 - C1 -1EVK 3.2 SYT_ECOLI
11 PsiBlast_PDB 74.8941% -92 - C1 -1EVL - SYT_ECOLI -
9 PsiBlast_PDB 74.7441% -92 - C1 -4P3P 9.4 SYT_ECOLI
56 HHSearch 74.7041% -92 - C1 -1EVL - SYT_ECOLI -
39 PsiBlast_CBE 74.5441% -91 - C1 -1EVL - SYT_ECOLI -
12 PsiBlast_PDB 74.5241% -93 - C1 -1FYF 8.5 SYT_ECOLI
27 PsiBlast_CBE 74.4141% -92 - C1 -4P3P 9.0 SYT_ECOLI
10 PsiBlast_PDB 74.3241% -91 - C1 -1EVK - SYT_ECOLI -
7 PsiBlast_PDB 74.0641% -91 - C1 -4HWS 9.6 SYT_ECOLI
36 PsiBlast_CBE 74.0041% -94 - C1 -1FYF 8.6 SYT_ECOLI
37 PsiBlast_CBE 73.9341% -91 - C1 -1EVL - SYT_ECOLI -
6 PsiBlast_PDB 73.7941% -96 - C1 -4HWR 6.8 SYT_ECOLI
23 PsiBlast_CBE 73.7341% -92 - C1 -4HWS 9.7 SYT_ECOLI
8 PsiBlast_PDB 73.6941% -91 - C1 -4P3O 8.9 SYT_ECOLI
28 PsiBlast_CBE 73.4741% -90 - C1 -4P3O 8.9 SYT_ECOLI
26 PsiBlast_CBE 73.3741% -93 - C1 -4HWO 8.6 SYT_ECOLI
5 PsiBlast_PDB 73.3541% -90 - C1 -4HWP 8.2 SYT_ECOLI
41 PsiBlast_CBE 73.2940% -97 - C1 -4HWT 5.6 SYTC_HUMAN
25 PsiBlast_CBE 73.2541% -91 - C1 -4HWP 8.5 SYT_ECOLI
4 PsiBlast_PDB 73.2541% -90 - C1 -4HWO 8.6 SYT_ECOLI
14 PsiBlast_PDB 71.6240% -96 - C1 -4HWT 5.5 SYTC_HUMAN
57 HHSearch 71.2236% -90 - C1 -3UH0 8.5 SYTM_YEAST
18 PsiBlast_PDB 62.0637% -73 - C1 -3UH0 8.5 SYTM_YEAST