@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_0145: (2015-12-12 )
MQHLVLIGFMGSGKSSLAQELGLALKLEVLDTDMIISERVGLSVRGIFEELGEDNFRMFEKNLIDELKTLKTPHIISTGGGIVMHENLKGLGTTFYLKMDFETLIKRLNQKEREKRPLLNNLTQAKELFEKRQALYEKNASFIIDARGGLNNSLKQVLQFIA

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OSA_A_4(3N2E)
AROK_HELPY
[Raw transfer]




SKM_C_3(1ZUI)
AROK_HELPY
[Raw transfer]




OSA_B_7(3N2E)
AROK_HELPY
[Raw transfer]




S3P_A_2(2IYZ)
AROK_MYCTU
[Raw transfer]




ADP_A_2(3MUF)
AROK_HELPY
[Raw transfer]




SKM_A_6(1U8A)
AROK_MYCTU
[Raw transfer]




PEG_A_6(3VAA)
AROK_BACTN
[Raw transfer]




21 PsiBlast_CBE 97.1998%-131 - C2 -3HR7 - AROK_HELPY -
4 PsiBlast_PDB 96.0398%-123 - C2 -3MUF 5.8 AROK_HELPY
22 PsiBlast_CBE 95.7998%-123 - C2 -3N2E 6.5 AROK_HELPY
3 PsiBlast_PDB 94.9798%-129 - C2 -3HR7 - AROK_HELPY -
5 PsiBlast_PDB 94.7598%-120 - C2 -3N2E 6.0 AROK_HELPY
6 PsiBlast_PDB 94.6898%-132 - C2 -3MRS - AROK_HELPY -
2 PsiBlast_PDB 94.0898%-116 - C2 -1ZUI 5.2 AROK_HELPY
60 HHSearch 93.5399%-130 - C2 -1ZUH - AROK_HELPY -
1 PsiBlast_PDB 93.3298%-130 - C2 -1ZUH - AROK_HELPY -
62 HHSearch 69.0334%-102 - C2 -3TRF - AROK_COXBU -
63 HHSearch 68.3835%-109 - C2 -2PT5 - AROK_AQUAE -
52 Fugue 68.2926%-106 - C2 -1SHK - AROL_DICCH -
61 HHSearch 67.3639% -88 * C2 *1VIA - ? -
66 HHSearch 66.7430%-101 - C2 -3VAA 2.9 AROK_BACTN
64 HHSearch 65.7630%-107 - C2 -1KAG - AROK_ECOLI -
65 HHSearch 65.6128% -93 - C2 -2IYV - AROK_MYCTU -
48 PsiBlast_CBE 65.1431%-105 - C2 -3VAA - AROK_BACTN -
10 PsiBlast_PDB 64.1234%-101 - C2 -3TRF - AROK_COXBU -
46 PsiBlast_CBE 63.8531%-112 - C2 -3VAA - AROK_BACTN -
23 PsiBlast_CBE 62.8234%-100 - C2 -3TRF - AROK_COXBU -
35 PsiBlast_CBE 58.3232% -93 - C2 -2IYZ 4.0 AROK_MYCTU
17 PsiBlast_PDB 58.2132% -95 - C2 -1U8A 3.5 AROK_MYCTU