@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_0150: (2015-12-12 )
MFKRLRRLRSSENLRAMVRETRLNINDFIAPLFVIESDSGIKNEISSMPGVYQMSIEPLLKECEELVGLGIKAVLLFGIPKHKDATGSHALNKDHIVAKATREIKKRFKDLIVIADLCFCEYTDHGHCGILENASVSNDKTLKILNLQGLILAESGVDILAPSNMMDGNVLSLRKALDKAGYFHTPIMSYSTKFASSYYGPFRDVANSPPSFGDRKSYQMDYANQKEALLESLEDEKQGADILMVKPALAYLDIVKEIRDHTLLPLALYNVSGEYAMLKLAQKHNLINYESVLLETMTCFKRAGADMIISYHAKEVANLLQRN

Atome Classification :

(34 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PBG_A_3(1E51)
HEM2_HUMAN
[Raw transfer]




PBG_A_4(1OHL)
HEM2_YEAST
[Raw transfer]




PB1_A_5(1PV8)
HEM2_HUMAN
[Raw transfer]




PB1_A_5(1PV8)
HEM2_HUMAN
[Raw transfer]




4OX_A_2(1GJP)
HEM2_YEAST
[Raw transfer]




DSB_A_7(1L6S)
HEM2_ECOLI
[Raw transfer]




DSB_A_7(1L6S)
HEM2_ECOLI
[Raw transfer]




DSB_B_8(1I8J)
HEM2_ECOLI
[Raw transfer]




4OX_A_7(1L6Y)
HEM2_ECOLI
[Raw transfer]




DSB_A_7(1I8J)
HEM2_ECOLI
[Raw transfer]




SHF_A_5(1B4K)
HEM2_PSEAE
[Raw transfer]




AYC_A_2(2WOQ)
HEM2_PSEAE
[Raw transfer]




DSB_B_6(2C1H)
HEM2_CHLP8
[Raw transfer]




SHF_A_5(1B4K)
HEM2_PSEAE
[Raw transfer]




SHF_A_2(1H7N)
HEM2_YEAST
[Raw transfer]




KAH_A_2(1H7P)
HEM2_YEAST
[Raw transfer]




SHF_A_2(1H7N)
HEM2_YEAST
[Raw transfer]




SHU_A_2(1H7R)
HEM2_YEAST
[Raw transfer]




SHF_A_3(1YLV)
HEM2_YEAST
[Raw transfer]




SHF_A_3(1W1Z)
HEM2_CHLP8
[Raw transfer]




SHF_A_3(1W1Z)
HEM2_CHLP8
[Raw transfer]




SHF_B_5(1W1Z)
HEM2_CHLP8
[Raw transfer]




DSB_A_2(1EB3)
HEM2_YEAST
[Raw transfer]




DAV_A_2(1H7O)
HEM2_YEAST
[Raw transfer]




DSB_A_4(2C1H)
HEM2_CHLP8
[Raw transfer]




SHO_A_2(1W31)
HEM2_YEAST
[Raw transfer]




3 PsiBlast_PDB 93.8851%-102 - C6 -1L6Y 4.4 HEM2_ECOLI
1 PsiBlast_PDB 93.5051% -97 - C6 -1B4E - HEM2_ECOLI -
21 PsiBlast_CBE 93.4451% -96 - C6 -1I8J 3.2 HEM2_ECOLI
4 PsiBlast_PDB 93.4451% -96 - C6 -1I8J 2.9 HEM2_ECOLI
13 PsiBlast_PDB 93.1544%-106 - C6 -2WOQ 3.5 HEM2_PSEAE
2 PsiBlast_PDB 93.0251% -96 - C6 -1L6S 2.3 HEM2_ECOLI
69 Fugue 92.6745%-108 - C6 -1B4K 3.7 HEM2_PSEAE
48 HHSearch 92.5844%-106 * C6 *1W1Z 2.5 HEM2_CHLP8
49 HHSearch 92.3451% -93 - C6 -1L6S 2.3 HEM2_ECOLI
12 PsiBlast_PDB 92.1944%-104 - C6 -1B4K 3.7 HEM2_PSEAE
14 PsiBlast_PDB 90.5543%-103 - C6 -1GZG - HEM2_PSEAE -
36 PsiBlast_CBE 89.4941%-108 - C6 -3OBK - ? -
6 PsiBlast_PDB 89.2343%-108 - C6 -1W1Z 2.5 HEM2_CHLP8
31 PsiBlast_CBE 89.2241%-109 - C6 -3OBK - ? -
24 PsiBlast_CBE 88.9843%-106 - C6 -2C1H 1.5 HEM2_CHLP8
37 PsiBlast_CBE 88.8441%-106 - C6 -3OBK - ? -
52 HHSearch 88.7641%-100 - C6 -3OBK - ? -
34 PsiBlast_CBE 88.3941%-106 - C6 -3OBK - ? -
18 PsiBlast_PDB 88.2641%-105 - C6 -3OBK - ? -
7 PsiBlast_PDB 88.0643%-108 - C6 -2C1H 3.1 HEM2_CHLP8
16 PsiBlast_PDB 87.6241%-113 - C6 -1E51 4.0 HEM2_HUMAN
25 PsiBlast_CBE 87.6143%-104 - C6 -1W1Z 2.5 HEM2_CHLP8
50 HHSearch 86.9035% -99 - C6 -1H7N 3.7 HEM2_YEAST
38 PsiBlast_CBE 86.3436% -99 - C6 -1GJP 2.3 HEM2_YEAST
40 PsiBlast_CBE 85.9436% -99 - C6 -1W31 3.5 HEM2_YEAST
39 PsiBlast_CBE 85.5836% -98 - C6 -1EB3 3.1 HEM2_YEAST
45 PsiBlast_CBE 85.5736% -99 - C6 -1H7P 3.4 HEM2_YEAST
20 PsiBlast_PDB 85.2836% -99 - C6 -1YLV 3.4 HEM2_YEAST
46 PsiBlast_CBE 85.2136%-100 - C6 -1H7N 3.7 HEM2_YEAST
43 PsiBlast_CBE 85.1636%-100 - C6 -1OHL 3.5 HEM2_YEAST
47 PsiBlast_CBE 84.5036%-104 - C6 -1H7O 2.4 HEM2_YEAST
44 PsiBlast_CBE 84.1236% -97 - C6 -1H7R 2.8 HEM2_YEAST
53 HHSearch 83.5540%-111 - C6 -1PV8 1.9 HEM2_HUMAN
17 PsiBlast_PDB 83.4041%-115 - C6 -1PV8 1.9 HEM2_HUMAN