@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_0170: (2015-12-13 )
MFSNQYIQQRIHKANSLREEGKNPYKNGLKRSLTNAAFLEKYAYVKGLEEPKDKEKCESVVGRVKLLRLMGKACFIKIEDESAILQAYVSQNELNDEFKSLKKHLEVGDIVLVKGFPFATKTGELSIHALEFHILSKTIVPLPEKFHGLSDIELRYRQRYLDLIVNPGVKDVFKKRSLIVSSVRKFFEMEGFLEVETPMMHPIPGGANARPFITYHNALEIERYLRIAPELYLKRLIVGGFEAVFEINRNFRNEGMDHSHNPEFTMIEFYWAYHTYEDLIELSKRLFDYLLKTLNLDSKIIYNDMEVDFNQTSVISYLDALETIGGISKGILEKEDRLLAYLLEQGIKVEPNLTHGKLLAEAFDHFVEHKLINPTFVTEYPIEISPLARRNDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFKNQVAEKEKGDEEAQYMDEDYVWALAHEMPPTAGQGIGIDRLVMLLTGAKSIKDVILFPAMRPVKNDFNVEGEE

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

LAD_B_2(1E1T)
SYK2_ECOLI
[Raw transfer]




ATP_A_3(1E24)
SYK2_ECOLI
[Raw transfer]




KAA_A_5(3A5Y)
EPMA_ECOLI
[Raw transfer]




AMP_B_7(3G1Z)
EPMA_SALTY
[Raw transfer]




ACP_A_3(1E22)
SYK2_ECOLI
[Raw transfer]




AMP_A_3(3G1Z)
EPMA_SALTY
[Raw transfer]




GOL_B_9(1E1T)
SYK2_ECOLI
[Raw transfer]




GOL_B_11(1E1O)
SYK2_ECOLI
[Raw transfer]




KRS_A_4(4YCU)
SYK_HUMAN
[Raw transfer]




KRS_B_8(4YCU)
SYK_HUMAN
[Raw transfer]




LYS_A_3(4EX5)
SYK_BURTA
[Raw transfer]




LYS_B_4(4EX5)
SYK_BURTA
[Raw transfer]




LYS_B_3(1E1O)
SYK2_ECOLI
[Raw transfer]




LYS_B_3(1E1O)
SYK2_ECOLI
[Raw transfer]




LYS_C_3(1BBU)
SYK1_ECOLI
[Raw transfer]




11 PsiBlast_PDB 96.4547% -80 - C7 -4EX5 3.2 SYK_BURTA
3 PsiBlast_PDB 96.3549% -87 - C7 -1LYL - SYK2_ECOLI -
4 PsiBlast_PDB 96.1949% -89 - C7 -1E1O 3.2 SYK2_ECOLI
21 PsiBlast_CBE 95.9349% -89 - C7 -1LYL - SYK2_ECOLI -
74 HHSearch 95.5450% -80 - C7 -1E1O 3.2 SYK2_ECOLI
6 PsiBlast_PDB 95.4449% -85 - C7 -1E22 6.7 SYK2_ECOLI
2 PsiBlast_PDB 95.4050%-100 - C7 -1BBW - SYK1_ECOLI -
22 PsiBlast_CBE 95.3049% -86 - C7 -1LYL - SYK2_ECOLI -
32 PsiBlast_CBE 95.2547% -81 - C7 -4EX5 3.1 SYK_BURTA
7 PsiBlast_PDB 95.0949% -88 - C7 -1E24 7.0 SYK2_ECOLI
63 Fugue 94.9550% -84 - C7 -1LYL - SYK2_ECOLI -
9 PsiBlast_PDB 94.7447% -72 - C7 -3E9I - SYK_GEOSE -
5 PsiBlast_PDB 94.5549% -85 - C7 -1E1T 8.6 SYK2_ECOLI
8 PsiBlast_PDB 94.4347% -71 - C7 -3E9H - SYK_GEOSE -
10 PsiBlast_PDB 94.0847% -74 - C7 -3A74 - SYK_GEOSE -
1 PsiBlast_PDB 94.0850% -84 - C7 -1BBU 2.8 SYK1_ECOLI
24 PsiBlast_CBE 93.8047% -72 - C7 -3E9I - SYK_GEOSE -
23 PsiBlast_CBE 93.6947% -75 - C7 -3E9I - SYK_GEOSE -
30 PsiBlast_CBE 93.5447% -74 - C7 -3A74 - SYK_GEOSE -
26 PsiBlast_CBE 93.5047% -75 - C7 -3E9H - SYK_GEOSE -
36 PsiBlast_CBE 91.1240% -81 - C7 -4YCU 6.3 SYK_HUMAN
14 PsiBlast_PDB 90.3640% -78 - C7 -4YCU 5.7 SYK_HUMAN
84 HHSearch 64.8232% -68 * C7 *3A5Y 8.9 EPMA_ECOLI
52 PsiBlast_CBE 64.4532% -76 - C7 -3G1Z 6.5 EPMA_SALTY
19 PsiBlast_PDB 64.2732% -75 - C7 -3G1Z 6.6 EPMA_SALTY