@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_0183: (2015-12-13 )
MKDSFLFTSESVTEGHPDKMADQISDAVLDYIIERDKKAKVACETLVSNGFCMITGELKTSVYAPMQEIAREVVKKIGYTDALYGFDYRSAAVLNGIGEQSPDINQGVDREDGEIGAGDQGLMFGYACKETETLMPLPIHLAHQLAFALAQKRKDNTLPFLRPDGKSQVSVRYENNKPVSVDTIVISTQHSPEVSQKHLKEAVIEEIVYKVLPKEYLHDNIKFFINPTGKFVIGGPQGDAGLTGRKIIVDTYGGFCPHGGGAFSGKDPSKVDRSAAYAARYVAKNLVASGVCDKATVQLAYAIGVIEPVSIYVNTHNTSKHSSAELEKCVKSVFKLTPKGIIESLDLLRPIYSLTSAYGHFGRELEEFTWEKTNKVEEIKAFFKR

Atome Classification :

(30 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

3PO_A_3(4ODJ)
?
[Raw transfer]



SAM_A_3(2P02)
METK2_HUMAN
[Raw transfer]



ATP_B_9(1O93)
METK1_RAT
[Raw transfer]



SAM_A_3(2P02)
METK2_HUMAN
[Raw transfer]



SAM_A_4(2OBV)
METK1_HUMAN
[Raw transfer]



SAM_A_2(4ODJ)
?
[Raw transfer]



ATP_B_9(1O9T)
METK1_RAT
[Raw transfer]



AMB_C_3(1QM4)
METK1_RAT
[Raw transfer]



LIS_A_3(1O90)
METK1_RAT
[Raw transfer]



ADP_B_9(1O92)
METK1_RAT
[Raw transfer]



UNL_A_6(3S82)
METK_MYCA1
[Raw transfer]



UNL_A_5(3S82)
METK_MYCA1
[Raw transfer]



UNL_A_6(3S82)
METK_MYCA1
[Raw transfer]
48 HHSearch 97.6359% -81 - C4 -3IML - METK_BURPS -
52 HHSearch 97.3961% -78 - C4 -1P7L - METK_ECOLI -
2 PsiBlast_PDB 96.9762% -79 - C4 -1P7L - METK_ECOLI -
24 PsiBlast_CBE 96.9562% -80 - C4 -1P7L - METK_ECOLI -
25 PsiBlast_CBE 96.9162% -80 - C4 -1P7L - METK_ECOLI -
3 PsiBlast_PDB 96.9162% -80 - C4 -1RG9 - METK_ECOLI -
22 PsiBlast_CBE 96.8962% -80 - C4 -1RG9 - METK_ECOLI -
1 PsiBlast_PDB 96.8662% -81 - C4 -1FUG - METK_ECOLI -
21 PsiBlast_CBE 96.7962% -80 - C4 -1RG9 - METK_ECOLI -
26 PsiBlast_CBE 96.6462% -80 - C4 -1P7L - METK_ECOLI -
4 PsiBlast_PDB 96.6160% -83 - C4 -3IML - METK_BURPS -
23 PsiBlast_CBE 96.3862% -80 - C4 -1RG9 - METK_ECOLI -
9 PsiBlast_PDB 96.2954% -80 - C4 -2P02 5.2 METK2_HUMAN
35 PsiBlast_CBE 95.8254% -84 - C4 -4KTV - METK2_HUMAN -
51 HHSearch 95.7755% -78 * C4 *2P02 5.2 METK2_HUMAN
38 PsiBlast_CBE 95.7354% -81 - C4 -4KTT - METK2_HUMAN -
36 PsiBlast_CBE 95.7154% -81 - C4 -4KTT - METK2_HUMAN -
31 PsiBlast_CBE 95.5354% -86 - C4 -4NDN - METK2_HUMAN -
32 PsiBlast_CBE 95.4054% -80 - C4 -4NDN - METK2_HUMAN -
30 PsiBlast_CBE 95.0254% -78 - C4 -4NDN - METK2_HUMAN -
12 PsiBlast_PDB 93.9752% -85 - C4 -1QM4 2.0 METK1_RAT
13 PsiBlast_PDB 93.9652% -84 - C4 -1O90 3.0 METK1_RAT
17 PsiBlast_PDB 93.9052% -82 - C4 -2OBV 5.0 METK1_HUMAN
40 PsiBlast_CBE 93.6852% -84 - C4 -1O9T 3.6 METK1_RAT
50 HHSearch 93.5154% -85 - C4 -3S82 2.8 METK_MYCA1
14 PsiBlast_PDB 93.4252% -84 - C4 -1O92 3.4 METK1_RAT
15 PsiBlast_PDB 93.3952% -84 - C4 -1O93 3.2 METK1_RAT
5 PsiBlast_PDB 92.7152% -79 - C4 -3S82 2.8 METK_MYCA1
27 PsiBlast_CBE 92.4252% -80 - C4 -3S82 2.8 METK_MYCA1
18 PsiBlast_PDB 90.5446% -79 - C4 -4ODJ 5.1 ?