@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_0196: (2015-12-13 )
MSNQEYTFQTEINQLLDLMIHSLYSNKEIFLRELISNASDALDKLNYLMLTDEKLKGLNTTPSIHLSFDSQKKTLTIKDNGIGMDKSDLIEHLGTIAKSGTKSFLSALSGDKKKDSALIGQFGVGFYSAFMVASKIVVQTKKVTSHQAYAWVSDGKGKFEISECVKEEQGTEITLFLKEEDSHFASRWEIDSVVKKYSEHIPFPIFLTYTDTKFEGEGDNKKEVKEEKCDQINQASALWKMNKSELKEKDYKDFYQSFAHDNSEPLSYIHNKVEGSLEYTTLFYIPSKAPFDLFRVDYKSGVKLYVKRVFITDDDKELLPSYLRFVKGVIDSEDLPLNVSREILQQNKILANIRSASVKKILSEIERLSKDNKNYHKFYEPFGKVLKEGLYGDFENKEKLLELLRFYSKDKGEWISLKEYKENLKENQKSIYYLLGENLDLLKASPLLEKYAQKGYDVLLLSDEIDAFVMPGVNEYDKTPFRDASHSESLKELGLAEIHDEVKDQFKDLIKAFEENLKDEIKGVELSGHLTSAVALIGDEPNAMMANWMRQMGQSVPESKKTLELNPNHAILQKLLKCEDKEQLSAFIWLLYDGAKLLEKGALKDAKSFNERLNSVLLKAL

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_B_9(2O1U)
?
[Raw transfer]



ANP_A_8(2O1U)
?
[Raw transfer]



ANP_A_8(2O1U)
?
[Raw transfer]



ANP_A_8(2O1U)
?
[Raw transfer]



ADP_B_8(2O1V)
ENPL_CANFA
[Raw transfer]



ADP_A_5(1Y4S)
HTPG_ECOLI
[Raw transfer]



ADP_A_5(1Y4S)
HTPG_ECOLI
[Raw transfer]



ADP_B_6(1Y4S)
HTPG_ECOLI
[Raw transfer]



ADP_A_7(2O1V)
ENPL_CANFA
[Raw transfer]
1 PsiBlast_PDB 92.0645% -80 - C2 -2IOQ - HTPG_ECOLI -
21 PsiBlast_CBE 91.9945% -79 - C2 -2IOP - HTPG_ECOLI -
104 HHSearch 89.2046% -73 - C2 -2IOQ - HTPG_ECOLI -
24 PsiBlast_CBE 89.0036% -84 - C2 -2O1V 4.7 ENPL_CANFA
25 PsiBlast_CBE 88.3536% -83 - C2 -2O1U 4.9 ?
6 PsiBlast_PDB 86.0236% -79 - C2 -2O1V 2.4 ENPL_CANFA
5 PsiBlast_PDB 85.7936% -79 - C2 -2O1U 4.7 ?
123 Fugue 85.1837% -75 - C2 -2O1U 4.7 ?
26 PsiBlast_CBE 85.0634% -77 - C3 -4J0B - ? -
8 PsiBlast_PDB 83.5034% -75 - C3 -4J0B - ? -
102 HHSearch 82.4136% -72 - C2 -2O1U 4.7 ?
103 HHSearch 79.3339% -63 - C3 -2CG9 - HSP82_YEAST -
2 PsiBlast_PDB 79.0346% -75 - C2 -1Y4S 5.2 HTPG_ECOLI
3 PsiBlast_PDB 78.6946% -77 - C2 -1Y4U - HTPG_ECOLI -
7 PsiBlast_PDB 78.2540% -79 - C2 -2O1W - ? -
23 PsiBlast_CBE 78.0437% -65 - C3 -2CG9 - HSP82_YEAST -
108 HHSearch 77.9647% -76 - C2 -1Y4S 5.2 HTPG_ECOLI
4 PsiBlast_PDB 77.8137% -66 - C3 -2CG9 - HSP82_YEAST -
22 PsiBlast_CBE 77.7146% -76 - C2 -1Y4S 5.1 HTPG_ECOLI
28 PsiBlast_CBE 74.0536% -78 - C3 -4Z1I - TRAP1_HUMAN -