@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_0202: (2015-12-13 )
MVVLGSTGSIGKNALKIAKKFGVKIEALSCGKNIALINEQIKVFKPKKVAILDPNDLNNLEPLGAEVFVGLDGIDAMIEECVSNLVINAIVGVAGLKASFKSLQRNKKLALANKESLVSAGHLLDISQITPVDSEHFGLWALLQNKTLKPKSLIISASGGAFRDTPLDLIAIQNAQNALKHPNWSMGDKITIDSASMVNKLFEILETYWLFGASLKIDALIERSSIVHALVEFEDNSVIAHLASADMQLPISYAINPKLASLSASIKPLDLYALSAIKFEPISVERYTLWRYKDLLLENPKLGVVLNASNEVAMKKFLNQEIAFGGFIQIISQALELYAKKSFKLSSLDEVLALDKEVRERFGSVARV

Atome Classification :

(63 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DXP_B_4(1Q0Q)
DXR_ECOLI
[Raw transfer]




DXP_A_3(1Q0Q)
DXR_ECOLI
[Raw transfer]




34F_A_3(2Y1F)
DXR_MYCTU
[Raw transfer]




F98_B_8(4A03)
DXR_MYCTU
[Raw transfer]




C0K_A_4(3R0I)
DXR_ECOLI
[Raw transfer]




FM6_A_4(3ZHX)
DXR_MYCTU
[Raw transfer]




FM5_A_3(2Y1G)
DXR_MYCTU
[Raw transfer]




FM5_A_4(3RAS)
DXR_MYCTU
[Raw transfer]




F98_A_4(4A03)
DXR_MYCTU
[Raw transfer]




DCV_A_5(3RAS)
DXR_MYCTU
[Raw transfer]




C0K_B_6(3R0I)
DXR_ECOLI
[Raw transfer]




CBQ_A_6(1T1S)
DXR_ECOLI
[Raw transfer]




34F_A_3(2Y1D)
DXR_MYCTU
[Raw transfer]




FOM_A_5(2EGH)
DXR_ECOLI
[Raw transfer]




FM7_A_3(3ZHZ)
DXR_MYCTU
[Raw transfer]




IMB_E_5(1T1R)
DXR_ECOLI
[Raw transfer]




FOM_A_5(1ONP)
DXR_ECOLI
[Raw transfer]




CBQ_B_7(1T1S)
DXR_ECOLI
[Raw transfer]




FOM_B_6(1ONP)
DXR_ECOLI
[Raw transfer]




FM8_A_3(3ZI0)
DXR_MYCTU
[Raw transfer]




IMB_F_6(1T1R)
DXR_ECOLI
[Raw transfer]




NDP_A_5(3ZHY)
DXR_MYCTU
[Raw transfer]




NDP_A_4(2Y1F)
DXR_MYCTU
[Raw transfer]




NDP_B_9(4A03)
DXR_MYCTU
[Raw transfer]




NDP_A_4(4AIC)
DXR_MYCTU
[Raw transfer]




NDP_A_4(2JCV)
DXR_MYCTU
[Raw transfer]




NDP_B_6(3WQQ)
DXR_PLAFX
[Raw transfer]




NDP_A_3(2JD1)
DXR_MYCTU
[Raw transfer]




NDP_A_4(2JCX)
DXR_MYCTU
[Raw transfer]




DE2_A_5(4RCV)
?
[Raw transfer]




NDP_A_5(4A03)
DXR_MYCTU
[Raw transfer]




NDP_B_6(4OOF)
DXR_MYCTU
[Raw transfer]




NDP_B_9(4AIC)
DXR_MYCTU
[Raw transfer]




NDP_B_8(3ZHY)
DXR_MYCTU
[Raw transfer]




NDP_A_3(3RAS)
DXR_MYCTU
[Raw transfer]




NDP_A_3(2JD0)
DXR_MYCTU
[Raw transfer]




NDP_B_2(3WQS)
DXR_PLAFX
[Raw transfer]




NDP_A_4(4RCV)
?
[Raw transfer]




NDP_A_3(3WQR)
DXR_PLAFX
[Raw transfer]




NDP_B_6(3AU9)
DXR_PLAFX
[Raw transfer]




NDP_A_3(3WQQ)
DXR_PLAFX
[Raw transfer]




NDP_B_6(3AUA)
DXR_PLAFX
[Raw transfer]




NDP_A_3(3AUA)
DXR_PLAFX
[Raw transfer]




NDP_A_3(3AU9)
DXR_PLAFX
[Raw transfer]




NDP_A_3(4OOF)
DXR_MYCTU
[Raw transfer]




NDP_B_9(2Y1F)
DXR_MYCTU
[Raw transfer]




NDP_A_5(1Q0Q)
DXR_ECOLI
[Raw transfer]




NDP_E_5(1Q0L)
DXR_ECOLI
[Raw transfer]




NDP_A_5(1Q0Q)
DXR_ECOLI
[Raw transfer]




NDP_B_6(1Q0Q)
DXR_ECOLI
[Raw transfer]




NDP_B_6(2JCV)
DXR_MYCTU
[Raw transfer]




NDP_A_3(3A06)
DXR_THEMA
[Raw transfer]




NDP_B_8(2EGH)
DXR_ECOLI
[Raw transfer]




NDP_B_6(3RAS)
DXR_MYCTU
[Raw transfer]




NDP_B_6(3ANM)
DXR_ECOLI
[Raw transfer]




NDP_B_5(3ANN)
DXR_ECOLI
[Raw transfer]




NDP_B_5(3ANL)
DXR_ECOLI
[Raw transfer]




NDP_A_7(2EGH)
DXR_ECOLI
[Raw transfer]




NDP_A_3(3ANL)
DXR_ECOLI
[Raw transfer]




NDP_A_4(3ANM)
DXR_ECOLI
[Raw transfer]




NDP_A_3(3ANN)
DXR_ECOLI
[Raw transfer]




21 PsiBlast_CBE 91.5135% -98 - C6 -1R0L - DXR_ZYMMO -
2 PsiBlast_PDB 90.8335% -98 - C6 -1R0L - DXR_ZYMMO -
1 PsiBlast_PDB 90.6935% -98 - C6 -1R0K - DXR_ZYMMO -
24 PsiBlast_CBE 90.5035% -99 - C6 -1R0K - DXR_ZYMMO -
26 PsiBlast_CBE 89.9135% -98 - C6 -1R0K - DXR_ZYMMO -
23 PsiBlast_CBE 89.4735% -97 - C6 -1R0L - DXR_ZYMMO -
22 PsiBlast_CBE 88.5835% -99 - C6 -1R0L - DXR_ZYMMO -
25 PsiBlast_CBE 87.8635% -98 - C6 -1R0K - DXR_ZYMMO -
20 PsiBlast_PDB 87.2633% -90 - C6 -3R0I 3.7 DXR_ECOLI
101 HHSearch 86.4235% -81 - C6 -1Q0Q 11.1 DXR_ECOLI
103 HHSearch 86.3535% -89 - C6 -1R0K - DXR_ZYMMO -
42 PsiBlast_CBE 85.6233% -86 - C6 -3ANL 8.9 DXR_ECOLI
43 PsiBlast_CBE 85.4633% -88 - C6 -3R0I 3.6 DXR_ECOLI
16 PsiBlast_PDB 85.2233% -84 - C6 -3ANL 9.6 DXR_ECOLI
14 PsiBlast_PDB 85.2235% -99 - C6 -3A06 - DXR_THEMA -
104 HHSearch 85.1434% -89 - C6 -3A06 9.2 DXR_THEMA
39 PsiBlast_CBE 85.1235% -99 - C6 -3A06 - DXR_THEMA -
40 PsiBlast_CBE 85.0433% -84 - C6 -3ANN 8.4 DXR_ECOLI
41 PsiBlast_CBE 85.0233% -85 - C6 -3ANM 8.6 DXR_ECOLI
19 PsiBlast_PDB 84.8233% -85 - C6 -2EGH 6.7 DXR_ECOLI
47 PsiBlast_CBE 84.7133% -86 - C6 -1T1R 4.0 DXR_ECOLI
46 PsiBlast_CBE 84.6433% -83 - C6 -1T1S 4.0 DXR_ECOLI
17 PsiBlast_PDB 84.4633% -84 - C6 -3ANM 9.5 DXR_ECOLI
18 PsiBlast_PDB 84.2733% -84 - C6 -3ANN 9.9 DXR_ECOLI
48 PsiBlast_CBE 83.9433% -82 - C6 -1T1R 3.6 DXR_ECOLI
45 PsiBlast_CBE 83.8133% -84 - C6 -1T1S 3.1 DXR_ECOLI
53 PsiBlast_CBE 83.2033% -81 - C6 -1Q0Q 10.8 DXR_ECOLI
54 PsiBlast_CBE 82.9933% -81 - C6 -1Q0Q 11.1 DXR_ECOLI
44 PsiBlast_CBE 82.9533% -83 - C6 -2EGH 6.5 DXR_ECOLI
7 PsiBlast_PDB 82.8436% -89 - C6 -3WQS 11.5 DXR_PLAFX
5 PsiBlast_PDB 82.8136% -87 - C6 -3WQQ 9.2 DXR_PLAFX
4 PsiBlast_PDB 82.7536% -87 - C6 -3AUA 9.0 DXR_PLAFX
50 PsiBlast_CBE 82.0333% -85 - C6 -1ONP 3.0 DXR_ECOLI
30 PsiBlast_CBE 81.9436% -86 - C6 -3AU9 10.0 DXR_PLAFX
28 PsiBlast_CBE 81.8636% -85 - C6 -3WQQ 9.3 DXR_PLAFX
29 PsiBlast_CBE 81.5136% -87 - C6 -3AUA 9.8 DXR_PLAFX
6 PsiBlast_PDB 81.0936% -86 - C6 -3WQR 9.0 DXR_PLAFX
55 PsiBlast_CBE 81.0833% -81 - C6 -1Q0L 10.8 DXR_ECOLI
3 PsiBlast_PDB 80.9536% -86 - C6 -3AU9 9.7 DXR_PLAFX
71 PsiBlast_CBE 80.5234% -91 - C6 -2Y1D 4.1 DXR_MYCTU
49 PsiBlast_CBE 80.3933% -83 - C6 -1ONP 3.2 DXR_ECOLI
82 PsiBlast_CBE 80.3434% -83 - C6 -3ZHZ 5.9 DXR_MYCTU
83 PsiBlast_CBE 79.5434% -84 - C6 -3ZHY 6.2 DXR_MYCTU
58 PsiBlast_CBE 79.1734% -83 - C6 -4AIC 6.8 DXR_MYCTU
81 PsiBlast_CBE 79.1534% -88 - C6 -3ZI0 5.0 DXR_MYCTU
59 PsiBlast_CBE 78.4434% -78 - C6 -4AIC 8.9 DXR_MYCTU
63 PsiBlast_CBE 78.4134% -79 - C6 -3RAS 10.6 DXR_MYCTU
88 PsiBlast_CBE 78.0734% -82 - C6 -4RCV 8.0 ?
61 PsiBlast_CBE 77.6734% -81 - C6 -4A03 10.9 DXR_MYCTU
62 PsiBlast_CBE 77.6434% -80 - C6 -3RAS 10.3 DXR_MYCTU
67 PsiBlast_CBE 77.6234% -80 - C6 -2Y1F 9.8 DXR_MYCTU
78 PsiBlast_CBE 77.6034% -83 - C6 -2JCV 8.1 DXR_MYCTU
66 PsiBlast_CBE 77.6034% -80 - C6 -2Y1F 6.6 DXR_MYCTU
60 PsiBlast_CBE 77.5734% -81 - C6 -4A03 10.6 DXR_MYCTU
79 PsiBlast_CBE 77.3334% -80 - C6 -2JCV 10.8 DXR_MYCTU
77 PsiBlast_CBE 77.3334% -78 - C6 -2JD1 9.4 DXR_MYCTU
94 PsiBlast_CBE 76.9233% -80 - C6 -2JCX 9.6 DXR_MYCTU
90 PsiBlast_CBE 76.8533% -78 - C6 -2JD0 7.0 DXR_MYCTU
99 PsiBlast_CBE 76.4733% -77 - C6 -4OOF 9.4 DXR_MYCTU
84 PsiBlast_CBE 76.3134% -81 - C6 -3ZHY 9.6 DXR_MYCTU
86 PsiBlast_CBE 76.1934% -79 - C6 -3ZHX 5.3 DXR_MYCTU
65 PsiBlast_CBE 76.1534% -78 - C6 -2Y1G 5.5 DXR_MYCTU
100 PsiBlast_CBE 76.0933% -78 - C6 -4OOF 11.4 DXR_MYCTU