@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_0210: (2015-12-13 )
MKILSYLKKFYLFLLIGAIMQANESMGAKLPKTDERVIYLAGGCFWGLEAYMERIYGVIDASSGYANGKTSSTNYEKLHESDHAESVKVIYDPKKISLDKLLRYYFKVIDPVSVNKQGNDVGRQYRTGIYYVNSADKEVIDNALKALQKEVKGKIAIEVEPLKNYVRAEEYHQDYLKKHPGGYCHIDLKKADEVIVDDDKYTKPSDEVLKKKLTKLQYEVTQNKHTEKPFENEYYNKEEEGIYVDITTGEPLFSSADKYDSGCGWPSFSKPINKDVVKYEDDESLNRKRIEVLSRIGKAHLGHVFNDGPKELGGLRYCINSAALRFIPLKDMEKEGYGEFIPYIKKGELKKYIQDKKSH

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ACY_A_5(3CEZ)
MSRB_BURP1
[Raw transfer]



P6G_A_6(3HCH)
MSRAB_NEIMA
[Raw transfer]



ACY_B_6(3CEZ)
MSRB_BURP1
[Raw transfer]



P6G_B_12(3HCH)

[Raw transfer]



CHAIN_G_7(3E0M)
MSAB1_STRPN
[Raw transfer]
-
CHAIN_E_5(3E0M)
MSAB1_STRPN
[Raw transfer]
-
CHAIN_E_5(3E0M)
MSAB1_STRPN
[Raw transfer]
-
CHAIN_F_6(3E0M)
MSAB1_STRPN
[Raw transfer]
-
43 HHSearch 92.7059% -81 - C4 -3E0M 4.5 MSAB1_STRPN
1 PsiBlast_PDB 91.6359% -81 - C4 -3E0M 4.5 MSAB1_STRPN
22 PsiBlast_CBE 91.2359% -78 - C4 -3E0M 3.2 MSAB1_STRPN
21 PsiBlast_CBE 89.0859% -73 - C4 -3E0M 4.2 MSAB1_STRPN
2 PsiBlast_PDB 67.8254% -95 - C4 -3BQE - MSRAB_NEIMA -
44 HHSearch 66.2961% -83 - C4 -3BQH - -
4 PsiBlast_PDB 65.9454% -95 - C4 -3BQF - -
3 PsiBlast_PDB 64.6154% -84 - C4 -3BQH - -
14 PsiBlast_PDB 60.9640% -79 - C4 -2J89 - ? -
45 HHSearch 60.6730% -85 - C4 -1NWA - MSRA_MYCTU -
50 HHSearch 60.5739% -78 * C4 *2J89 - ? -
26 PsiBlast_CBE 60.2740% -73 - C4 -3PIL - MSRA_YEAST -
18 PsiBlast_PDB 59.8632% -69 - C4 -4D7L - MSRA_CORDI -
15 PsiBlast_PDB 58.9740% -68 - C4 -3PIL - MSRA_YEAST -
27 PsiBlast_CBE 58.9332% -72 - C4 -4D7L - MSRA_CORDI -
13 PsiBlast_PDB 58.8237% -78 - C4 -4GWB - MSRA3_RHIME -
28 PsiBlast_CBE 58.7332% -71 - C4 -4D7L - MSRA_CORDI -
47 HHSearch 57.7239% -69 - C4 -3PIM - MSRA_YEAST -
17 PsiBlast_PDB 57.6836% -78 - C4 -1NWA - MSRA_MYCTU -
46 HHSearch 57.5158% -61 - C4 -3HCG - MSRAB_NEIMA -
23 PsiBlast_CBE 56.8656% -61 - C4 -3HCH 2.3
8 PsiBlast_PDB 55.2056% -60 - C4 -3HCH 4.2 MSRAB_NEIMA
11 PsiBlast_PDB 50.3451% -46 - C4 -3CEZ 3.8 MSRB_BURP1
25 PsiBlast_CBE 49.3551% -44 - C4 -3CEZ 2.4 MSRB_BURP1