@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_0215: (2015-12-13 )
MIIIPARLKSSRFENKMLEDIFGLPMVVRCAKNANLVDECVVACDDESIMKACQKFHIKAVLTSKHHNSGTERCLEAAQILGLKNDERVLNLQGDEPFLEKKVILALLEATQNAPFMATCAKVIDEEQAKSPNLVKVVLDSQNNALYFSRSLIPFLRDFDAKRQTPLLGHIGIYGFHNKEILEELCALKPCVLEDTEKLEQLRALYYQKKILVKIVQSESMGIDTKEDLQNALKIFSPNLLKR

Atome Classification :

(29 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CTP_C_13(3K8D)
KDSB_ECOLI
[Raw transfer]



CTP_A_7(3K8D)
KDSB_ECOLI
[Raw transfer]



CTP_A_7(3K8D)
KDSB_ECOLI
[Raw transfer]



CTP_A_4(2Y6P)
KDSB_AQUAE
[Raw transfer]



CTP_B_10(3K8D)
KDSB_ECOLI
[Raw transfer]



CTP_D_16(3K8D)
KDSB_ECOLI
[Raw transfer]



CMK_A_4(1GQC)
KPSU5_ECOLX
[Raw transfer]



CTP_B_6(1GQ9)
KPSU5_ECOLX
[Raw transfer]



CMK_A_4(1VH3)
KDSB_HAEIN
[Raw transfer]



CDP_B_4(1H7H)
KPSU5_ECOLX
[Raw transfer]



C5P_B_6(1GQC)
KPSU5_ECOLX
[Raw transfer]



C5P_B_4(1H7T)
KPSU5_ECOLX
[Raw transfer]



CTP_B_4(1H7G)
KPSU5_ECOLX
[Raw transfer]



KDO_A_3(3DUV)
KDSB_HAEIN
[Raw transfer]



IPA_A_7(2Y6P)
KDSB_AQUAE
[Raw transfer]



IPA_C_15(2Y6P)
KDSB_AQUAE
[Raw transfer]
1 PsiBlast_PDB 95.5040%-104 - C1 -4XWI - KDSB_PSEAE -
6 PsiBlast_PDB 93.3636%-115 - C1 -3TQD - KDSB_COXBU -
2 PsiBlast_PDB 91.7937%-109 - C1 -3OAM - KDSB_VIBCH -
57 Fugue 90.3035%-118 * C1 *1H7E - KPSU5_ECOLX -
4 PsiBlast_PDB 89.1338%-110 - C1 -3K8E - KDSB_ECOLI -
3 PsiBlast_PDB 88.7338%-101 - C1 -3K8D 8.4 KDSB_ECOLI
24 PsiBlast_CBE 88.4338%-101 - C1 -3K8D 8.2 KDSB_ECOLI
23 PsiBlast_CBE 88.4338%-100 - C1 -3K8D 8.1 KDSB_ECOLI
37 HHSearch 88.1334%-104 - C1 -3K8D 8.5 KDSB_ECOLI
40 HHSearch 88.0134%-113 - C1 -3TQD - KDSB_COXBU -
58 Fugue 87.7435%-108 - C1 -1H7E - KPSU5_ECOLX -
22 PsiBlast_CBE 87.7238%-102 - C1 -3K8D 7.8 KDSB_ECOLI
5 PsiBlast_PDB 87.3535%-101 - C1 -1VIC - KDSB_HAEIN -
35 HHSearch 85.6634%-108 - C1 -1VIC - KDSB_HAEIN -
34 HHSearch 85.5133%-111 - C1 -1H7E - KPSU5_ECOLX -
27 PsiBlast_CBE 85.0536%-114 - C1 -1H7G 4.6 KPSU5_ECOLX
16 PsiBlast_PDB 85.0336%-119 - C1 -1H7H - KPSU5_ECOLX -
15 PsiBlast_PDB 84.9436%-117 - C1 -1H7G - KPSU5_ECOLX -
14 PsiBlast_PDB 84.8136%-117 - C1 -1H7F - KPSU5_ECOLX -
26 PsiBlast_CBE 84.6436%-116 - C1 -1H7H 5.4 KPSU5_ECOLX
19 PsiBlast_PDB 84.4736%-107 - C1 -1GQC 7.4 KPSU5_ECOLX
30 PsiBlast_CBE 83.7436%-114 - C1 -1GQ9 5.7 KPSU5_ECOLX
25 PsiBlast_CBE 83.2036%-113 - C1 -1H7T 4.0 KPSU5_ECOLX
29 PsiBlast_CBE 81.7936%-108 - C1 -1GQC 4.7 KPSU5_ECOLX
39 HHSearch 80.6532%-112 - C1 -2Y6P 7.8 KDSB_AQUAE
33 PsiBlast_CBE 79.6237% -88 - C1 -2Y6P 2.7 KDSB_AQUAE
7 PsiBlast_PDB 78.6734%-104 - C1 -3DUV 4.5 KDSB_HAEIN
31 PsiBlast_CBE 77.9637% -85 - C1 -2Y6P 4.0 KDSB_AQUAE
8 PsiBlast_PDB 76.2434%-117 - C1 -1VH3 7.2 KDSB_HAEIN