@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_0232: (2015-12-13 )
MELNQPPLPTEIDDDAYHKPSFNDLGLKESVLKSVYEAGFTSPSPIQEKAIPAVLQGRDVIAQAQTGTGKTAAFALPIINNLKNNHTIKALVITPTRELAMQISDEIFKLGKHTRTKTVCVYGGQSVKKQCEFIKKNPQVMIATPGRLLDHLKNERIHKFVPKVVVLDESDEMLDMGFLDDIEEIFDYLPSEAQILLFSATMPEPIKRLADKILENPIKIHIAPSNITNTDITQRFYVINEHERAEAIMRLLDTQAPEKSIVFTRTKKEADELHQFLASKNYKSTALHGDMDQRDRRSSIMAFKKNDADVLVATDVASRGLDISGVSHVFSYHLPLNTESYIHRIGRTGRAGKKGMAITLVTPLEYKELLRMQKEIDSEIELFEIPTINENQIIKTLHDAKVSEGIISLYEQLTEIFEPSQLVLKLLSLQFETSKIGLNQQEIDAIQNPKEKTPKPPNKKTQHEPAHSFKKSHHRDRHPKTNRYSKKHKRR

Atome Classification :

(48 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_7(3FHT)
DD19B_HUMAN
[Raw transfer]




ANP_B_12(3FHT)
DD19B_HUMAN
[Raw transfer]




ANP_A_7(3FHT)
DD19B_HUMAN
[Raw transfer]




ANP_A_3(3G0H)
DD19B_HUMAN
[Raw transfer]




8OD_B_7(3NBF)
?
[Raw transfer]




ADP_A_3(3PEW)
DBP5_YEAST
[Raw transfer]




ADP_A_3(3PEY)
DBP5_YEAST
[Raw transfer]




8OP_C_10(3NBF)
?
[Raw transfer]




ADP_A_4(4PX9)
DDX3X_HUMAN
[Raw transfer]




ADP_B_5(4PX9)
DDX3X_HUMAN
[Raw transfer]




ADP_A_4(3FE2)
DDX5_HUMAN
[Raw transfer]




ADP_A_4(3RRM)
DBP5_YEAST
[Raw transfer]




ADP_B_8(3FE2)
DDX5_HUMAN
[Raw transfer]




AMP_B_5(3IUY)
DDX53_HUMAN
[Raw transfer]




ADP_C_6(4PX9)
DDX3X_HUMAN
[Raw transfer]




AMP_A_3(3IUY)
DDX53_HUMAN
[Raw transfer]




8OX_B_6(3MWL)
?
[Raw transfer]




ANP_B_4(3B7G)
DDX20_HUMAN
[Raw transfer]




8OP_B_6(3MWK)
?
[Raw transfer]




ANP_A_3(3B7G)
DDX20_HUMAN
[Raw transfer]




ADP_A_3(2OXC)
DDX20_HUMAN
[Raw transfer]




AMP_A_8(2GXS)
?
[Raw transfer]




ADP_A_3(3DKP)
DDX52_HUMAN
[Raw transfer]




AMP_A_3(3BER)
DDX47_HUMAN
[Raw transfer]




AMP_A_5(2VSX)
IF4A_YEAST
[Raw transfer]




ADP_B_4(3FMO)
DD19B_HUMAN
[Raw transfer]




8OD_A_5(3NBF)
?
[Raw transfer]




ADP_A_3(3RRN)
DBP5_YEAST
[Raw transfer]




ADP_A_3(3EWS)
DD19B_HUMAN
[Raw transfer]




AMP_A_2(2GXQ)
?
[Raw transfer]




ADP_B_4(2OXC)
DDX20_HUMAN
[Raw transfer]




AMP_B_6(2VSO)
IF4A_YEAST
[Raw transfer]




AMP_A_5(2VSO)
IF4A_YEAST
[Raw transfer]




AMP_B_9(2GXS)
?
[Raw transfer]




AMP_B_6(2VSX)
IF4A_YEAST
[Raw transfer]




8OP_D_12(3NBF)
?
[Raw transfer]




FLC_C_3(1T6N)
DX39B_HUMAN
[Raw transfer]




FLC_D_4(1T6N)
DX39B_HUMAN
[Raw transfer]




EOH_A_4(2PL3)
DDX10_HUMAN
[Raw transfer]




30 PsiBlast_CBE 90.2236%-118 - C3 -2VSX 4.4 IF4A_YEAST
31 PsiBlast_CBE 89.9836%-118 - C3 -2VSX 5.0 IF4A_YEAST
45 PsiBlast_CBE 89.7533%-110 - C3 -3EWS 6.6 DD19B_HUMAN
115 HHSearch 89.4140% -87 - C3 -2DB3 - VASA1_DROME -
32 PsiBlast_CBE 89.1536%-118 - C3 -2VSO 5.1 IF4A_YEAST
33 PsiBlast_CBE 89.0936%-117 - C3 -2VSO 4.9 IF4A_YEAST
26 PsiBlast_CBE 88.9740% -94 - C3 -2DB3 - VASA1_DROME -
9 PsiBlast_PDB 88.8740% -92 - C3 -2DB3 - VASA1_DROME -
27 PsiBlast_CBE 88.5240% -95 - C3 -2DB3 - VASA1_DROME -
25 PsiBlast_CBE 88.4440% -93 - C3 -2DB3 - VASA1_DROME -
38 PsiBlast_CBE 88.0934%-102 - C3 -3RRN 4.8 DBP5_YEAST
47 PsiBlast_CBE 87.6933%-103 - C3 -3FHT 8.4 DD19B_HUMAN
46 PsiBlast_CBE 87.6033%-101 - C3 -3FHT 9.2 DD19B_HUMAN
40 PsiBlast_CBE 87.5034% -95 - C3 -3PEW 7.9 DBP5_YEAST
41 PsiBlast_CBE 87.4434% -95 - C3 -3PEY 8.0 DBP5_YEAST
121 HHSearch 87.2542%-102 - C3 -1HV8 - H669_METJA -
120 HHSearch 87.0438% -99 * C4 *2I4I - DDX3X_HUMAN -
16 PsiBlast_PDB 86.9438%-106 - C3 -3EIQ - IF4A1_HUMAN -
112 HHSearch 86.7037%-105 - C3 -3EIQ - IF4A1_HUMAN -
42 PsiBlast_CBE 86.6533% -99 - C3 -3G0H 7.8 DD19B_HUMAN
119 HHSearch 85.9435% -97 - C3 -3FHT 8.4 DD19B_HUMAN
39 PsiBlast_CBE 84.8534%-104 - C3 -3RRM 5.6 DBP5_YEAST
50 PsiBlast_CBE 68.4244%-115 - C3 -2GXS 5.8 ?
51 PsiBlast_CBE 68.1744%-118 - C3 -2GXQ 6.1 ?
55 PsiBlast_CBE 68.0743%-114 - C3 -3NBF 4.1 ?
56 PsiBlast_CBE 67.8043%-122 - C3 -3MWL 4.6 ?
49 PsiBlast_CBE 67.6244%-113 - C3 -2GXS 4.8 ?
52 PsiBlast_CBE 67.5043%-120 - C3 -3NBF 3.2 ?
54 PsiBlast_CBE 66.8143%-114 - C3 -3NBF 5.4 ?
53 PsiBlast_CBE 66.6943%-115 - C3 -3NBF 4.4 ?
58 PsiBlast_CBE 66.4543%-117 - C3 -3MWK 4.1 ?
79 PsiBlast_CBE 65.6934%-116 - C3 -3FE2 6.2 DDX5_HUMAN
80 PsiBlast_CBE 65.1834%-116 - C3 -3FE2 5.2 DDX5_HUMAN
77 PsiBlast_CBE 63.9336%-109 - C3 -1T6N 2.9 DX39B_HUMAN
86 PsiBlast_CBE 63.5237%-110 - C3 -3FMO 6.8 DD19B_HUMAN
68 PsiBlast_CBE 62.6840%-107 - C3 -3BER 4.8 DDX47_HUMAN
76 PsiBlast_CBE 62.6535%-102 - C3 -4PX9 5.5 DDX3X_HUMAN
82 PsiBlast_CBE 62.3536%-107 - C3 -3IUY 5.9 DDX53_HUMAN
78 PsiBlast_CBE 62.3336%-106 - C3 -1T6N 2.5 DX39B_HUMAN
75 PsiBlast_CBE 62.2735%-100 - C3 -4PX9 5.1 DDX3X_HUMAN
83 PsiBlast_CBE 62.1236%-110 - C3 -3IUY 5.4 DDX53_HUMAN
81 PsiBlast_CBE 61.9238%-115 - C3 -2PL3 3.4 DDX10_HUMAN
88 PsiBlast_CBE 61.6833%-114 - C3 -3B7G 5.9 DDX20_HUMAN
89 PsiBlast_CBE 61.3033%-111 - C3 -3B7G 6.1 DDX20_HUMAN
74 PsiBlast_CBE 61.2035%-101 - C3 -4PX9 5.5 DDX3X_HUMAN
91 PsiBlast_CBE 60.8533%-111 - C3 -2OXC 7.1 DDX20_HUMAN
90 PsiBlast_CBE 60.6333%-113 - C3 -2OXC 6.2 DDX20_HUMAN
87 PsiBlast_CBE 56.4235%-102 - C3 -3DKP 6.0 DDX52_HUMAN