@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_0249: (2015-12-13 )
MNLFEKMTDQLHETLDSAIALALHHKNAEVTPMHMLFAMLNNSQGILIQALQKMPVDIEALKLSVQSELNKFAKVSQISKQNIQLNQALIQSLENAQGLMAKRGDSFIATDAYLLANMNLFESVLKPYLDTKELQKTLESLRKGRTIQDKNDDSNLESLEKFGIDLTQKALENKLDPVIGRDEEIIRMMQILIRKTKNNPILLGEPGVGKTAVVEGLAQRIVNKEVPKTLLNKRVVALDLSLLVAGAKYRGEFEERLKKVIEEVKKSANVILFIDEIHTIVGAGASEGGMDAANILKPALARGELHTIGATTLKEYRKYFEKDMALQRRFQPILLNEPSINEALQILRGLKETLETHHNITINDSALIASAKLSSRYITDRFLPDKAIDLIDEGAAQLKMQMESEPAKLSSVKRSIQRLEMEKQALEMENKESNHKRMQEILKELSDLKEEKIQLEAQFENEKEVFKEISRLKMEMEGLKKEAERFKRNGDYQQAAEIEYSKIPEKEKKEKELQHKWETMQQNGALLQNALTENNIAEIVSQWTHIPVQKMLQSEKNRVLNIESELQKRVVGQEKALKAIAKAIKRNKAGLSDSNKPIGSFLFLGPTGVGKTESAKALAQFLFDSDKNLIRIDMSEYMEKHAISRLIGAAPGYVGYEEGGQLTEAVRRKPYSVVLLDEVEKAHPDVFNLLLQVLDEGHLTDSKGVRVDFKNTILILTSNVASGALLEEDLSEADKQKAIKESLRQFFKPEFLNRLDEIISFNALDSHAIINIVGILFENVQKKALERGINITLDEKAKELIAEAGFDRFYGARPLKRALYEMVEDKLAELILEDKIKENDSVAFVVENNEIVPKIK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ACP_A_2(4LJA)

[Raw transfer]




ACP_A_2(4LJ9)

[Raw transfer]




MNT_C_8(4LJ7)

[Raw transfer]




MNT_B_6(4LJ7)
CLPB_THET8
[Raw transfer]




ADP_A_2(4LJ5)

[Raw transfer]




MNT_A_4(4LJ7)
CLPB_THET8
[Raw transfer]




ADP_A_4(4FCV)
CLPB_THET8
[Raw transfer]




ADP_A_4(4FCW)
CLPB_THET8
[Raw transfer]




ADP_A_4(4FD2)
CLPB_THET8
[Raw transfer]




ADP_B_5(4FD2)
CLPB_THET8
[Raw transfer]




ADP_D_6(4FD2)

[Raw transfer]




109 Fugue 87.9248% -77 - C2 -1QVR - CLPB_THET8 -
84 HHSearch 81.4145% -83 - C6 -3PXI - CLPC_BACSU -
1 PsiBlast_PDB 80.1341% -78 - C6 -3PXI - CLPC_BACSU -
83 HHSearch 77.5739% -89 - C6 -1R6B - CLPA_ECOLI -
4 PsiBlast_PDB 63.6057% -99 - C4 -4LJ5 6.6
22 PsiBlast_CBE 62.2457% -95 - C4 -4LJ7 7.0 CLPB_THET8
11 PsiBlast_PDB 62.1556% -95 - C4 -4FCV 6.7 CLPB_THET8
21 PsiBlast_CBE 62.1457%-101 - C4 -4LJ7 7.4
7 PsiBlast_PDB 61.9357% -94 - C4 -4LJA 7.1
5 PsiBlast_PDB 61.9357% -95 - C4 -4LJ7 8.6 CLPB_THET8
12 PsiBlast_PDB 61.6656% -96 - C4 -4FCW 7.4 CLPB_THET8
23 PsiBlast_CBE 61.6257% -98 - C4 -4FD2 6.2
24 PsiBlast_CBE 61.5357% -98 - C4 -4FD2 6.4 CLPB_THET8
2 PsiBlast_PDB 61.4052% -63 - C5 -4HSE - CLPB_THET8 -
10 PsiBlast_PDB 61.2057% -96 - C4 -4FD2 6.7 CLPB_THET8
6 PsiBlast_PDB 61.2057% -88 - C4 -4LJ9 6.7
9 PsiBlast_PDB 60.4257% -99 - C4 -4FCT - CLPB_THET8 -
3 PsiBlast_PDB 60.4257% -97 * C4 *4LJ4 - -
15 PsiBlast_PDB 55.6137% -81 - C6 -1R6B - CLPA_ECOLI -
14 PsiBlast_PDB 54.8237% -84 - C6 -1KSF - CLPA_ECOLI -