@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_0268: (2015-12-14 )
MQEILIPLKEKSYKVFLGELPEIKLKQKALIISDSIVAGLHLPYLLERLNALEVRVCVIESGEKYKNFHSLERILNNAFEMQLNRHSLMIALGGGVISDMVGFASSIYFRGIDFINIPTTLLAQVDASVGGKTGINTPYGKNLIGSFHQPKAVYMDLAFLKTLEKREFQAGVAEIIKMAVCFDKNLVERLETKDLKDCLEEVIFQSVNIKAQVVVQDEKERNIRAGLNYGHTFGMLIENETNYERFLHGEAIAIGMRMANDLALSLGMLTLKEYERIENLLKKFDLIFNYQITDIQKFYERLFLDKKSENQTLKFILPKGVGAFEIASHIPKETILKVLEKWH

Atome Classification :

(44 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAD_A_3(3OKF)
AROB_VIBCH
[Raw transfer]




NAD_A_3(3OKF)
AROB_VIBCH
[Raw transfer]




NAD_A_6(1DQS)
ARO1_EMENI
[Raw transfer]




NAD_B_12(3OKF)
AROB_VIBCH
[Raw transfer]




NAD_A_8(1XAG)
AROB_STAAR
[Raw transfer]




NAD_A_6(1DQS)
ARO1_EMENI
[Raw transfer]




NAD_A_5(1XAH)
AROB_STAAR
[Raw transfer]




NAD_B_6(1XAL)
AROB_STAAR
[Raw transfer]




NAD_A_5(1XAL)
AROB_STAAR
[Raw transfer]




NAD_B_4(3QBD)
AROB_MYCTU
[Raw transfer]




NAD_B_6(1XAH)
AROB_STAAR
[Raw transfer]




NAD_B_9(1NR5)
ARO1_EMENI
[Raw transfer]




NAD_B_6(1XAJ)
AROB_STAAR
[Raw transfer]




NAD_B_8(1DQS)
ARO1_EMENI
[Raw transfer]




NAD_A_5(1XAJ)
AROB_STAAR
[Raw transfer]




NAD_A_7(1NVB)
ARO1_EMENI
[Raw transfer]




NAD_A_19(1NRX)
ARO1_EMENI
[Raw transfer]




NAD_A_5(1SG6)
ARO1_EMENI
[Raw transfer]




NAD_A_3(3QBD)
AROB_MYCTU
[Raw transfer]




NAD_A_8(1NR5)
ARO1_EMENI
[Raw transfer]




NAD_B_20(1NRX)
ARO1_EMENI
[Raw transfer]




NAD_A_5(1SG6)
ARO1_EMENI
[Raw transfer]




NAD_B_6(1SG6)
ARO1_EMENI
[Raw transfer]




ADP_B_12(1NVF)
ARO1_EMENI
[Raw transfer]




ADP_B_7(1NVA)
ARO1_EMENI
[Raw transfer]




ADP_C_13(1NVF)
ARO1_EMENI
[Raw transfer]




ADP_A_11(1NVF)
ARO1_EMENI
[Raw transfer]




ADP_A_6(1NVA)
ARO1_EMENI
[Raw transfer]




CRB_A_7(1DQS)
ARO1_EMENI
[Raw transfer]




CRB_B_7(1NVD)
ARO1_EMENI
[Raw transfer]




CRB_A_10(1NR5)
ARO1_EMENI
[Raw transfer]




CRB_A_6(1NVD)
ARO1_EMENI
[Raw transfer]




CRB_B_9(1NVB)
ARO1_EMENI
[Raw transfer]




CRB_B_6(1XAI)
AROB_STAAR
[Raw transfer]




CRB_A_5(1XAI)
AROB_STAAR
[Raw transfer]




54 HHSearch 97.9840%-113 - C4 -3OKF 9.6 AROB_VIBCH
1 PsiBlast_PDB 97.0339%-113 - C4 -3OKF 9.5 AROB_VIBCH
21 PsiBlast_CBE 94.5039%-117 - C4 -3OKF 9.2 AROB_VIBCH
57 HHSearch 85.0232%-106 * C4 *3QBE - AROB_MYCTU -
43 Fugue 82.8534% -98 - C4 -1DQS 9.3 ARO1_EMENI
22 PsiBlast_CBE 81.9738% -98 - C4 -3ZOK - DHQS_ACTCH -
2 PsiBlast_PDB 81.7838% -94 - C4 -3ZOK - DHQS_ACTCH -
58 HHSearch 81.3035%-107 - C4 -1SG6 9.1 ARO1_EMENI
24 PsiBlast_CBE 79.7738% -93 - C4 -3ZOK - DHQS_ACTCH -
23 PsiBlast_CBE 79.6138% -93 - C4 -3ZOK - DHQS_ACTCH -
29 PsiBlast_CBE 74.3338%-101 - C4 -1NVE - ARO1_EMENI -
26 PsiBlast_CBE 73.9838%-108 - C4 -1SG6 7.3 ARO1_EMENI
4 PsiBlast_PDB 73.3735% -99 - C4 -3QBE - AROB_MYCTU -
31 PsiBlast_CBE 72.9438%-104 - C4 -1NVE - ARO1_EMENI -
56 HHSearch 72.8229%-106 - C4 -1XAH - AROB_STAAR -
25 PsiBlast_CBE 72.6135%-104 - C4 -3QBD 8.8 AROB_MYCTU
53 HHSearch 72.0328% -94 - C4 -2GRU - DOIS_BACCI -
9 PsiBlast_PDB 71.4938%-103 - C4 -1NVA 3.8 ARO1_EMENI
14 PsiBlast_PDB 71.3738% -99 - C4 -1SG6 7.1 ARO1_EMENI
12 PsiBlast_PDB 71.2938%-100 - C4 -1NVE - ARO1_EMENI -
3 PsiBlast_PDB 70.9935%-106 - C4 -3QBD 8.7 AROB_MYCTU
38 PsiBlast_CBE 70.5238% -90 - C4 -1DQS 8.3 ARO1_EMENI
37 PsiBlast_CBE 70.0138% -90 - C4 -1NR5 8.0 ARO1_EMENI
6 PsiBlast_PDB 69.7138% -90 - C4 -1NR5 8.3 ARO1_EMENI
32 PsiBlast_CBE 69.6138% -88 - C4 -1NVD 5.3 ARO1_EMENI
11 PsiBlast_PDB 69.5438% -89 - C4 -1NVD 5.3 ARO1_EMENI
7 PsiBlast_PDB 69.3938%-106 - C4 -1NRX 5.0 ARO1_EMENI
34 PsiBlast_CBE 68.8738% -99 - C4 -1NVA 3.5 ARO1_EMENI
5 PsiBlast_PDB 68.7038% -88 - C4 -1DQS 8.4 ARO1_EMENI
13 PsiBlast_PDB 68.4238% -85 - C4 -1NVF 3.7 ARO1_EMENI
28 PsiBlast_CBE 68.1638% -87 - C4 -1NVF 3.5 ARO1_EMENI
42 PsiBlast_CBE 67.7333% -94 - C4 -1XAH 8.4 AROB_STAAR
10 PsiBlast_PDB 66.8838% -83 - C4 -1NVB 6.1 ARO1_EMENI
36 PsiBlast_CBE 66.6038%-103 - C4 -1NRX 5.5 ARO1_EMENI
33 PsiBlast_CBE 66.5038% -84 - C4 -1NVB 4.7 ARO1_EMENI
27 PsiBlast_CBE 65.7438% -85 - C4 -1NVF 3.7 ARO1_EMENI
16 PsiBlast_PDB 65.6033% -90 - C4 -1XAH 8.2 AROB_STAAR
15 PsiBlast_PDB 64.4133% -83 - C4 -1XAG 6.9 AROB_STAAR
41 PsiBlast_CBE 63.5633% -80 - C4 -1XAI 4.3 AROB_STAAR
17 PsiBlast_PDB 62.8933% -78 - C4 -1XAI 4.5 AROB_STAAR
18 PsiBlast_PDB 61.7433% -80 - C4 -1XAJ 7.7 AROB_STAAR
19 PsiBlast_PDB 61.0633% -83 - C4 -1XAL 7.4 AROB_STAAR
39 PsiBlast_CBE 60.3133% -83 - C4 -1XAL 7.5 AROB_STAAR
40 PsiBlast_CBE 59.4933% -78 - C4 -1XAJ 7.8 AROB_STAAR