@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_0286: (2015-12-14 )
MILEVKDLKTYFFTDKGVNKAVDGVSFGLKKSQTLCIVGESGSGKSITSLSILGLIEKPGKIVGGSIQFLGQDLLQLKEKQMQKEIRGKKIGMIFQEPMTSLNPSYTVGFQINEVLKIHHPSLNKKERLERVVYELERVGIPHAGDKYHEYPFNLSGGQRQRVMIAMAMVCEPEILIADEPTTALDVTIQAQILELMKELQQKKGTSILFITHDLGVVAQIADEVVVMYKGHVVEQASAKELFADPRHPYTKALLNAIPKPGKEYRKKRLETVDENVDYLSFQKELR

Atome Classification :

(33 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_J_5(4YMU)
?
[Raw transfer]



ATP_A_6(4YMV)
?
[Raw transfer]



ATP_A_7(4YMU)
?
[Raw transfer]



ATP_J_5(4YMV)
?
[Raw transfer]



ANP_J_5(3C41)
?
[Raw transfer]



AGS_B_6(3C4J)
?
[Raw transfer]



ADP_A_5(2Q0H)
?
[Raw transfer]



AGS_A_4(3C4J)
?
[Raw transfer]



ANP_K_6(3C41)
?
[Raw transfer]



AT4_D_8(2OLK)
?
[Raw transfer]



AT4_B_6(2OLK)
?
[Raw transfer]



ADP_A_2(4U00)
?
[Raw transfer]



ADP_B_6(2Q0H)
?
[Raw transfer]



AT4_A_5(2OLK)
?
[Raw transfer]



AT4_C_7(2OLK)
?
[Raw transfer]



ADP_B_6(2OLJ)
?
[Raw transfer]
108 Fugue 92.1634%-104 - C1 -3TUZ - METN_ECOLI -
1 PsiBlast_PDB 84.7638%-114 - C1 -4FWI - ? -
4 PsiBlast_PDB 82.7934%-102 - C1 -3TUZ - METN_ECOLI -
24 PsiBlast_CBE 80.5734%-105 - C1 -3TUI - METN_ECOLI -
23 PsiBlast_CBE 79.8634% -99 - C1 -3TUZ - METN_ECOLI -
3 PsiBlast_PDB 79.7534% -99 - C1 -3TUI - METN_ECOLI -
21 PsiBlast_CBE 79.5434%-107 - C1 -3TUZ - METN_ECOLI -
22 PsiBlast_CBE 79.3434% -98 - C1 -3TUZ - METN_ECOLI -
7 PsiBlast_PDB 78.6833% -95 - C1 -4U02 - ? -
105 HHSearch 78.1331%-101 - C1 -1B0U - HISP_SALTY -
25 PsiBlast_CBE 77.6234%-100 - C1 -3TUI - METN_ECOLI -
87 HHSearch 77.5536%-101 - C1 -3TUI - METN_ECOLI -
10 PsiBlast_PDB 76.5133%-104 - C1 -2OUK - ? -
6 PsiBlast_PDB 76.4233% -95 - C1 -4U00 5.7 ?
20 PsiBlast_PDB 76.3232% -90 - C1 -2YYZ - ? -
27 PsiBlast_CBE 76.1933% -97 - C1 -4U02 - ? -
26 PsiBlast_CBE 76.1134% -95 - C1 -3TUI - METN_ECOLI -
28 PsiBlast_CBE 75.8133%-100 - C1 -4U02 - ? -
35 PsiBlast_CBE 75.0833%-101 - C1 -2OLK 5.9 ?
30 PsiBlast_CBE 75.0333%-106 - C1 -3C4J 5.2 ?
37 PsiBlast_CBE 74.6633%-100 - C1 -2OLK 5.7 ?
11 PsiBlast_PDB 74.2833% -97 - C1 -2Q0H 5.4 ?
13 PsiBlast_PDB 73.7333% -94 - C1 -3C41 6.4 ?
39 PsiBlast_CBE 73.6233%-100 - C1 -3C41 5.6 ?
36 PsiBlast_CBE 73.4333%-100 - C1 -2OLK 5.9 ?
41 PsiBlast_CBE 73.2632% -97 - C1 -4YMU 5.1 ?
12 PsiBlast_PDB 72.8333% -97 - C1 -3C4J 6.4 ?
9 PsiBlast_PDB 72.6333%-101 - C1 -2OLK 5.8 ?
17 PsiBlast_PDB 71.5132% -99 - C1 -4YMV 5.0 ?
31 PsiBlast_CBE 71.3933% -98 - C1 -2Q0H 5.6 ?
40 PsiBlast_CBE 70.4132% -96 - C1 -4YMV 4.7 ?
16 PsiBlast_PDB 70.1032% -96 - C1 -4YMU 5.3 ?
38 PsiBlast_CBE 69.3633% -97 - C1 -2OLJ 5.6 ?