@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_0287: (2015-12-14 )
MKLLEIKELKKSYAIDRGLFKPKRVIHALNGISFEVEQNEVLSIVGESGCGKSTTAKILAGIERQDSGAIYFNGKRHLHFSKQDWFDYRKKVQMIFQDPYSSLNPRWKVGEIIAEPLLLNSHFSKKEIKTKVLEIMQKVGLKLEWIDRYPHQFSGGQRQRIGIARALILHPSVVICDEPVSALDVSIQAQVLNLLLDLQKEMGLTYIFISHDLGVVEHISDKIIVMNQGQIVETGDVDSVISAPKHPYTQKLLNAVPHLEKSMQRFAE

Atome Classification :

(28 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_J_5(4YMU)
?
[Raw transfer]



ATP_J_5(4YMV)
?
[Raw transfer]



ATP_A_7(4YMU)
?
[Raw transfer]



ATP_A_6(4YMV)
?
[Raw transfer]



ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]



AGS_A_4(3C4J)
?
[Raw transfer]



ADP_A_5(2Q0H)
?
[Raw transfer]



ADP_A_2(4U00)
?
[Raw transfer]
110 HHSearch 91.1237%-114 - C1 -2YYZ - ? -
94 Fugue 90.7633%-115 - C1 -3TUZ - METN_ECOLI -
2 PsiBlast_PDB 89.6335%-100 - C1 -3TUI - METN_ECOLI -
3 PsiBlast_PDB 89.3035%-107 - C1 -3TUZ - METN_ECOLI -
22 PsiBlast_CBE 88.5435%-104 - C1 -3TUZ - METN_ECOLI -
24 PsiBlast_CBE 88.1135%-105 - C1 -3TUI - METN_ECOLI -
103 HHSearch 88.0335%-113 - C1 -3TUI - METN_ECOLI -
25 PsiBlast_CBE 87.9335%-105 - C1 -3TUI - METN_ECOLI -
26 PsiBlast_CBE 86.5335%-103 - C1 -3TUI - METN_ECOLI -
23 PsiBlast_CBE 85.8335%-105 - C1 -3TUZ - METN_ECOLI -
21 PsiBlast_CBE 85.6735%-104 * C1 *3TUZ - METN_ECOLI -
5 PsiBlast_PDB 85.2637%-115 - C1 -2YYZ - ? -
117 HHSearch 82.8733%-112 - C1 -1B0U - HISP_SALTY -
93 Fugue 82.6927%-107 - C1 -1Z47 - ? -
1 PsiBlast_PDB 81.8637%-106 - C1 -3DHW - METN_ECOLI -
106 HHSearch 81.5735%-111 - C1 -2IT1 - ? -
15 PsiBlast_PDB 80.3232%-133 - C1 -1V43 - ? -
104 HHSearch 80.3131%-120 - C1 -1V43 - ? -
14 PsiBlast_PDB 80.2032%-133 - C1 -1VCI - ? -
8 PsiBlast_PDB 80.1633%-112 - C1 -4U02 - ? -
7 PsiBlast_PDB 80.0633%-113 - C1 -4U00 4.4 ?
19 PsiBlast_PDB 79.7430%-110 - C1 -2Q0H 5.5 ?
60 PsiBlast_CBE 78.6032%-123 - C1 -1B0U 4.0 HISP_SALTY
11 PsiBlast_PDB 78.3033%-120 - C1 -4YMU 5.2 ?
32 PsiBlast_CBE 77.9733%-120 - C1 -4YMU 4.6 ?
12 PsiBlast_PDB 77.0933%-120 - C1 -4YMV 4.7 ?
31 PsiBlast_CBE 76.6833%-118 - C1 -4YMV 4.1 ?
20 PsiBlast_PDB 76.3830%-110 - C1 -3C4J 6.7 ?